Oryza glaberrima (African rice): 127759988
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Entry
127759988 CDS
T08853
Name
(RefSeq) 25.3 kDa vesicle transport protein-like
KO
K08517
vesicle transport protein SEC22
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04130
SNARE interactions in vesicular transport
ogl04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127759988
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127759988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127759988
Membrane trafficking [BR:
ogl04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
127759988
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
127759988
NCBI-ProteinID:
XP_052140157
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Position
1:complement(6804473..6807312)
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AA seq
199 aa
AA seq
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MVKLTMIARVTDDLPLVEGLDDGRDLKDADFYKQQAKLLFKNLSKGQHEASRMSIETGPY
LFHYIIEGRVCYLTICDCSYPKKLAFQYLEYLKNEFERVNGNQIETAARPYAFIKFDTFI
QKTKKLYLDTRTQRNLAKLNDELYEVHQIMTRNFQEVLGVGEKLDHEFAFAPYLCYAASF
IIVFSTMDLSMISVHMRLT
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagctgacaatgatagcacgtgttactgatgaccttccgttagtggagggatta
gatgatggtcgggatctgaaggatgctgacttctacaagcagcaagctaaactgttgttc
aagaacttatcgaaagggcaacatgaagcatcaaggatgtcaattgagactgggccatac
cttttccattacatcatcgagggccgtgtgtgctatttgacaatatgtgactgctcttat
ccgaagaaacttgctttccagtacttagaatatctcaaaaatgaatttgagagggtcaat
ggcaaccaaattgaaactgctgcaagaccatatgcttttattaagtttgacactttcata
cagaagacgaagaagttgtatttggataccagaacccaaaggaacctggccaagttgaat
gatgagctttatgaggtgcaccagattatgactcgcaattttcaagaagttctcggtgtt
ggtgaaaaactagatcatgagtttgcctttgcaccttatctgtgttatgctgcatcgttc
atcatagtttttagcacgatggacttgtcaatgatttctgtgcatatgagattaacttga
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