Oryza glaberrima (African rice): 127760138
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Entry
127760138 CDS
T08853
Name
(RefSeq) sorting nexin 1
KO
K17917
sorting nexin-1/2
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127760138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127760138
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ogl04990
]
127760138
Membrane trafficking [BR:
ogl04131
]
Endocytosis
Macropinocytosis
Sorting nexins
127760138
Domain-containing proteins not elsewhere classified [BR:
ogl04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
127760138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
DUF7623
LBP_M
CCM2_C
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
127760138
NCBI-ProteinID:
XP_052140312
UniProt:
I1NTK9
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All DBs
Position
1:complement(34130306..34134593)
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AA seq
399 aa
AA seq
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MSQERSQSQSPRSPASAAGVPFLSISVTDPVKMGTGVQAYISYRVITKTNLPDFEGQEKI
VIRRYSDFEWLHDRLAEKYKGIFIPPLPEKNAVEKFRFSKEFIELRRQALDLFVNRIASH
PELKQSGDLKIFLQADEEKMDRERSYETGIFKKPSDFLQMFKDVQSKVSDVVLGKEKPVE
ESSPEYEKLKNYIFELENHLAEAQKQAFRLVKRHRELGQSLADFGKAIKLLGACEGDSLE
KVFSEVGSKSEMLSVKLQREADNLLFNFEEPLKDYVRAVQSIKATMVDRANAFRQHHDLF
QQKEYKGVNLEKLKFVNPDKFSELEAEVRELTADSEEATKRFEHIVAVMNEELARFQEQK
TADIGFAFHEFAKGQAKLAKDIADAWRGVLPKLEACSTS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggagaggagccagtcgcagagcccccggtcgccggcgtcggcggctggggtg
ccgttcctgtcgatctccgtcacagatcctgtgaagatgggtaccggagtccaggcctac
atctcctatcgcgtcatcaccaagaccaacctgcctgactttgaggggcaagagaaaatt
gttatccggcgctatagtgactttgagtggttgcatgatcgtcttgctgagaagtacaaa
ggcatttttatacctccccttccagagaagaatgctgttgaaaaattccggtttagcaaa
gagttcattgaattacggcgtcaagccctggatctatttgtcaatagaatagcttcacat
cctgaactcaagcaaagtggagatttgaagatatttttgcaggcagatgaagagaaaatg
gatagagaaaggtcttatgaaactggtatattcaagaagccttctgatttcttacagatg
tttaaggatgtacaatcaaaagtcagtgatgttgttctgggaaaagaaaagcctgtggag
gaatctagtcctgaatatgaaaagcttaaaaattacatatttgagctagaaaaccattta
gcagaggcacagaaacaagcattccgtcttgtgaaaagacaccgagaacttgggcaatct
ttggcggactttgggaaggctattaagcttttaggtgcttgtgaaggggactccttggaa
aaagttttttcagaagttggatcaaagtcagagatgttatcagtaaagctgcaaagagag
gcagacaaccttctctttaactttgaagagcctttgaaagattatgtacgtgctgtgcag
tcgataaaagcaactatggtggatcgagccaatgctttcaggcagcatcatgatttattt
cagcagaaggaatataaaggggttaatctcgaaaaattgaagttcgtgaaccctgataaa
ttttctgaactagaagctgaggtccgagagttgacagcagacagtgaggaggctacaaag
aggtttgagcacatagttgcagtaatgaatgaagagcttgcacgtttccaagagcagaaa
acagctgatattggattcgcattccatgaatttgccaaaggccaagcaaagttagctaaa
gatattgctgatgcatggcgaggcgtcctcccaaagctcgaagcctgttccacttcataa
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