Oryza glaberrima (African rice): 127760416
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Entry
127760416 CDS
T08853
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogl01009
]
127760416
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127760416
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
127760416
Protein phosphatases and associated proteins [BR:
ogl01009
]
HAD phosphatases
Fcp/Scp phosphatases
127760416
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127760416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
Ribosomal_S5
Motif
Other DBs
NCBI-GeneID:
127760416
NCBI-ProteinID:
XP_052140632
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All DBs
Position
1:complement(33873510..33882237)
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AA seq
842 aa
AA seq
DB search
MAMPRAPPQAAVPGGGAGAAAGGVTMRMFHGDVFLGEAEVFPMKQGAEGSLPFPSNEIRI
SHLSPTSERCPPLAILQTIAPFSVRCKLQAKLMPPHPSLHRLYLTCFNEYKSAVVVVGDE
ELHLVAMPSKVEKVPCFWCCSVRSGIYAASVGMLNLRCLAIVFDLDETLIVANTMKSFED
RIEMLSRRMDIEDDPVRIAGMSAEIKRYIEDRELLKEFIDTDTVTDNGRIVGTQKEEVLP
ISGGQERVLRPVIRLPERNAILTRINPEVRDTSVFVKLRPAWEDLRSYLTAKGRKRFEVY
VCTMAERDYALEMWRLLDPEANLISSHNLAERVVCVKSGSKKCLQNVFKDKGCHPKMAMV
IDDRLQVWDEKDQPRVHVVPAYTPYYAPQAEMANAVPVLCVARNVACNVRGGFFREFDEN
LLRKVFELMYENELLDLPYAPDVGDYLVCEDTNFAPNNKDVAPIPEGMSGAEVGKRLNGL
AYPRDQKQIPSSTRLSDDDGVALRGIPGGTNIQSNGGSLATTPSLFVTVLQEIGRLCESR
VEFRSTVSSGKNMQFSVEVLFSNEKIGIGIGKTRDEAQILAAEKALQNLESNYLSFMAPV
AGVLNKDVNKPPGSGNGFLEDITLSEDISMEEPSGSTLKEQDHSKALDRLSSVISLIREL
CLEDQHVVFRDQVRDSGSALNGEYHFQAELGGQILGRGIGLNKDFAKLQAAEEALKTLKT
TTDPQIKKHLRPMQQLNFPLYPTQRFAACRSFRVLNGGTARPCDQPKLQGFPGPGHVIEE
NAGQPQPIILYWIAFLVQDGILTVASSKTRSCGCSSSVIAILCCHVCLPTKLIWNLVVFV
QC
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgccccgcgccccgccccaggcggccgtccccggaggaggggccggtgccgcc
gccggtggggtcaccatgcggatgttccacggcgacgtgttcctcggcgaggcggaggtg
ttcccgatgaagcagggggccgaggggagcctgccgttcccgagcaacgagatccgcatc
agccacctctcgccgacgagcgagcggtgcccgccgctcgccatcctgcagaccatcgcg
cccttctccgtgcgatgcaagctccaggccaagctgatgcctccccacccgagcctacac
cgcctctacctcacttgcttcaacgagtacaagagcgcagtggtagtagttggagatgag
gagctacacctagtggcaatgccgagcaaggtggagaaggtgccatgcttctggtgctgt
tcagtacgctctgggatctatgcagcatctgttgggatgctgaacttgcggtgccttgct
atcgtatttgatctcgatgaaacccttattgtcgctaacacaatgaagtcctttgaggac
cggatcgagatgctttcccgtaggatggatattgaagacgaccccgtcaggatagcaggg
atgtctgcagaaatcaagcggtatattgaggacagggagctgctcaaggagttcattgac
acagacacagttacagataatggcagaatcgttgggacccaaaaggaggaagttctgcct
atctctggtgggcaggagcgtgttctccggcctgttatcaggctgccagaaaggaatgcg
attctaactcgcataaatccagaggttcgcgatactagtgtttttgtaaagctaaggcct
gcttgggaggatttgagaagttacctgactgctaagggacgcaaacgatttgaggtctat
gtatgtacaatggctgagagagattatgctcttgagatgtggaggcttcttgatccagaa
gccaacttgataagctctcataaccttgcagagcgtgtagtatgtgtaaagtcaggttcg
aaaaagtgtctgcagaatgtttttaaagacaaaggatgccatccgaagatggccatggta
attgatgaccgactgcaggtttgggatgagaaggatcaacctcgagttcatgttgtccca
gcatatactccatattatgccccacaagctgagatggcaaatgctgtgcctgtgctttgt
gttgcaagaaatgttgcttgcaatgttcgtggtggtttcttcagagagttcgatgaaaat
ctattgagaaaagtgtttgaactaatgtatgaaaatgagttgctagatcttccatatgct
cctgatgttggtgactacttagtctgtgaggacactaattttgcaccaaacaataaggat
gttgcccctatacctgagggtatgagtggagctgaagtagggaagaggttgaatgggctg
gcatatcctagagaccagaaacaaataccatcatcaacccgtttgtcagatgacgacgga
gtggcactccgtggtattccaggtggtacaaatatccaatctaacgggggatcattggca
acaaccccctcattatttgtcacggtgttgcaagaaattggacggctgtgcgaatccagg
gtggagttcaggtctactgtaagcagtggaaaaaacatgcaattttctgttgaggttcta
tttagtaatgaaaaaatcgggatcggcattggaaaaacaagagatgaagcccaaatacta
gctgctgaaaaagctctccagaatttggaaagcaattacttgtcattcatggctcctgtt
gctggagttcttaataaagatgtgaacaagcctcctgggagtggaaatggctttctcgaa
gatattactctctcagaggatatttctatggaagagccatctggaagtacattaaaagaa
caggatcattcaaaagctttggataggttgtcctctgttataagtcttattagagaactt
tgcttggaggaccaacatgtagtatttcgcgatcaagtacgggattctggctcagcatta
aatggagaataccatttccaggctgaattaggaggacaaattcttgggaggggcattggt
ttgaacaaagattttgcgaagcttcaggctgcagaagaggcgctgaagaccttgaaaaca
actacggacccacaaatcaagaagcatttgagaccaatgcaacagctgaatttcccctta
tatcccacacagaggtttgcagcatgtagaagctttcgagttttgaatggaggcaccgcg
agaccgtgtgatcagccaaaactgcagggctttcctggtccaggccatgtcattgaagaa
aatgctggccagccccagcctattattctctactggatcgccttccttgtgcaagatggc
atcctcaccgttgcttccagcaaaaccagaagctgcggctgcagtagcagtgtgattgcc
atcttgtgctgccatgtttgcctccccactaagctcatctggaatcttgtggtgtttgtc
caatgctaa
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