Oryza glaberrima (African rice): 127760605
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Entry
127760605 CDS
T08853
Name
(RefSeq) alpha-amylase 3, chloroplastic isoform X1
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00500
Starch and sucrose metabolism
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
127760605
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
127760605
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Motif
Pfam:
Ig_N_CWD1
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
127760605
NCBI-ProteinID:
XP_052140850
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Position
1:27245913..27255183
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AA seq
887 aa
AA seq
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MAVASWSIPAIPRAGPTARGVLLGGAFLTAARPPVAWRCRATLPRRVRLGGVVARAGAAE
TPVAGSGEAGLLFSEKFPLRRSRTVEGKAWVRVDAEPDGEGKCKVVIGCDVEGKWVLHWG
VSYDGEQGREWDQPPSDMRPPGSVPIKDYAIETSLDTPHNSEGKTIHEVQIKIDKGTSIA
AINFVLKEEETGAWFQHKGQDFRIPLSGSFGGDLLGTEQDIDVRPVIQHTHISDFLGALG
HLSNVLQKPEGPIAEPHKTVPDDKGSRTKHISGFYEEYPILKTVYVQNFITVNVRENNGT
TKHAVEFDTDIPGEVIIHWGVCKDNTMTWEIPPEPHPPATKIFRQKALQTMLQQKADGTG
NSLSFLLDGEYSGLIFVVKLDEYTWLRNVENGFDFYIPLTRADAEADKQKADDKSSQADG
LISDIRNLVVGLSSRRGQRAKNKVLQEDILQEIERLAAEAYSIFRSPTIDTVEESVYIDD
SSIVKPACSGTGSGFEILCQGFNWESHKSGKWYVELGSKAKELSSMGFTIVWSPPPTDSV
SPEGYMPRDLYNLNSRYGTMEELKEAVKRFHEAGMKVLGDAVLNHRCAQFQNQNGVWNIF
GGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQEFVRSDLKEWLCWMRKEVGY
DGWRLDFVRGFWGGYVHDYLEASEPYFAVGEYWDSLSYTYGEMDYNQDAHRQRIVDWINA
TNGTAGAFDVTTKGILHSALERSEYWRLSDEKGKPPGVLGWWPSRAVTFIENHDTGSTQG
HWRFPFGMELQGYVYILTHPGTPAIFYDHIFSHLQPEIAKLISIRNRQKIHCRSKIKILK
AEGNLYAAEIDERVTMKIGAGHFEPSGPTNWVVAAEGQDYKVWEVSS
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgagctggagcattccggcgatcccgcgggcgggtccgacagcgaggggt
gtgctgctcggcggcgccttcctgacggccgcgcggccgcccgtggcgtggcggtgccgg
gccacgctccctaggagagtgaggctcggtggcgtggtggcccgtgccggtgcggcggag
acgccggtggccggctccggggaagccgggttgctgttctccgagaagttccccttgcgc
cgatcccgaacggtggaagggaaggcgtgggtgagggtcgatgcggagccggatggggag
ggcaagtgcaaggttgtgatcgggtgtgatgtagaggggaagtgggtgctgcattggggt
gtctcctacgatggtgagcagggaagagaatgggaccaacctccttcagacatgagacct
cctggttcagtgcctattaaggactatgcaattgaaacatctttggacactccacacaat
tcagaaggcaagacgattcatgaagtgcaaatcaaaattgataagggcacatcaattgct
gctatcaattttgttctaaaggaagaggaaacaggtgcttggtttcagcacaagggtcag
gatttcagaatacctttaagtggatcctttggtggagatctactaggaacagaacaagat
attgatgtcaggccagttatccaacatactcacatctctgatttcttaggggctttaggt
cacctatctaacgtgttacagaaacctgagggacctattgctgagcctcataaaactgta
cccgatgataaaggttcaagaaccaaacacatttcaggtttctatgaggaatacccaatc
ttaaaaacggtgtatgttcagaattttataactgttaatgtgagggaaaacaatggaaca
actaaacatgccgtggaattcgacactgatattcctggagaagttatcattcattgggga
gtttgcaaagacaataccatgacatgggagatccccccagaaccacatccacctgcaacg
aagatattccgacagaaagctcttcagaccatgctacaacaaaaagctgatggaacaggc
aactctctatcattcttactggatggagagtattctggtctgatttttgtggtaaaactt
gatgagtatacttggttgagaaatgtggagaatggatttgatttctacattcctcttaca
agagcagacgccgaggctgacaaacagaaagccgatgataagtcttcacaagctgatggc
ttaatcagtgatataaggaatctggtggttgggctgtcgtctagaagaggtcagcgagcg
aagaataaagttctgcaagaggatatcctacaagaaattgagaggttagcggcagaagct
tatagcatttttaggagccccacaattgatactgtagaggaatctgtttacattgatgac
tcatccattgtgaagcctgcttgttctggtactggatctggatttgaaatattgtgtcaa
ggatttaactgggaatctcataagtcaggaaaatggtatgtggaacttggctcaaaggcc
aaggagttgtcatcgatgggtttcaccattgtctggtcaccaccacctactgattctgtg
tcgcctgaaggatacatgccaagggatttgtataatctaaattccagatatgggaccatg
gaagagttgaaggaggctgtgaaacgttttcatgaagccggtatgaaggttcttggtgat
gccgtcctgaatcacaggtgtgctcaatttcagaaccaaaatggcgtctggaatattttt
ggtggacgccttaactgggatgatcgagcagttgttgcagatgatccacatttccaggga
agaggaaacaagagcagtggagataacttccatgcagccccaaacattgatcactcgcaa
gagtttgtgaggagtgatcttaaagaatggctttgttggatgagaaaggaagttggatac
gatggatggcgacttgattttgttcgcggattttggggtggatatgtccacgattacttg
gaagcaagcgaaccatattttgcagtaggagagtactgggattctctcagttacacctat
ggtgaaatggattataatcaagatgcccacaggcagagaatagttgattggataaatgct
acaaatggaactgctggtgcatttgatgttaccacgaaaggaatacttcactctgcactg
gaaagatctgagtactggcgtctgtctgatgaaaaaggaaaaccccctggagtgttaggt
tggtggccttcgcgtgctgtcacatttatagaaaatcatgacactggttctactcagggt
cattggagattcccctttggtatggagttgcaaggctatgtctacatcttaactcaccca
ggcactcctgcaatcttctatgatcatatattttcgcatttacagccagagattgctaaa
ttaatttctattagaaatcgccaaaagatccattgccgtagcaagatcaagatactgaaa
gcagagggaaatttatatgcggcagagattgatgagagggtaacaatgaagattggcgca
ggacattttgagccaagcggccccacaaactgggtagttgctgccgagggacaggattac
aaggtctgggaagtgtcatcgtag
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