Oryza glaberrima (African rice): 127760612
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Entry
127760612 CDS
T08853
Name
(RefSeq) transcription initiation factor IIF subunit beta isoform X1
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127760612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127760612
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
127760612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Tau95
Motif
Other DBs
NCBI-GeneID:
127760612
NCBI-ProteinID:
XP_052140855
LinkDB
All DBs
Position
1:complement(29972578..29976389)
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AA seq
277 aa
AA seq
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MAEEAKNLETARADRSVWLMKCPTVVSRAWQEAATAAASSSSSSDAAAGANSNSNANPNP
VVAKVIVSLDPLRSEDQQLQFKMEMAQTGNGNTPKSYSLNMFKDFVPMCVFSESNQGKLS
CEGKVGHKFDMEPHSDNLVNYGKLCRERTQKSMIKNRKLMVLANDNGMSMRPLPGLVGLM
SSGPKQKEKKPLPVKPSDMKRTRRDRRELENILFKLFERQPNWSLKNLMQETDQPEQFLK
EILNDLCFYNKRGPNQGTHELKPEYKKSTEDADATAT
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcgaagaatctggagacggcccgggccgaccgctccgtgtggctcatg
aagtgcccgaccgtcgtctcccgcgcctggcaggaggccgccaccgccgccgcctcctcc
tcctcctcctcggacgccgccgctggcgccaactccaactccaacgcgaaccctaacccc
gtcgtcgccaaggtcatcgtctccctcgacccgctccgctccgaagaccagcagctccag
ttcaagatggagatggctcaaacaggcaatggcaatacaccaaagagttactccttgaac
atgttcaaggattttgtgccaatgtgtgtcttttctgaatccaaccaagggaagctttca
tgcgaagggaaagtcgggcacaaatttgacatggaaccgcacagcgataatcttgtgaac
tatgggaagttatgtcgtgagaggactcaaaaatctatgattaaaaatagaaaattgatg
gtacttgcgaatgacaatggaatgagcatgaggccgttgcctggcttggtgggtctgatg
tcttctggtccaaaacagaaggagaagaagccactaccagtaaaaccatcagacatgaaa
agaacgagaagggatcgcagggaactggaaaatatcttattcaagctttttgagaggcag
ccgaattggtctcttaagaatctcatgcaagaaactgatcaaccagagcaattcttgaag
gagatattgaatgatctgtgtttctacaacaaaaggggtccaaatcaagggacgcatgaa
cttaagcctgaatacaagaaatctacagaggacgctgatgctactgctacttag
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