KEGG   Oryza glaberrima (African rice): 127760694
Entry
127760694         CDS       T08853                                 
Name
(RefSeq) protein decapping 5
  KO
K18749  protein LSM14
Organism
ogl  Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogl03019]
    127760694
Messenger RNA biogenesis [BR:ogl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127760694
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 127760694
NCBI-ProteinID: XP_052140953
UniProt: I1NJN1
LinkDB
Position
1:527550..532410
AA seq 619 aa
MAAEAPPSSSTSSSAGPPAAAGSSGGGAAASPDSYIGSLISLTSKSEIRYEGILYNINTE
ESSIGLRNVRSFGTEGRKKDGVQIPASTKVYEYILFRGSDIKDLQVKSSPPPPPPPQPAA
PHNDPAIIQSHYSQPASASSSLPSAGSAVLPDLSSQAAQYGLQRPSFQSNIPLYQPGSAP
WGSSAPPSAGNASGLSVPPMYWQGYYPPGGLPPHLQQPPLLQPGLSVPQGLQYAGLNPTL
SSGPQKLSELQPPLLQPPGTTQGPSSGILPTTTAPSANLLAPETSKPLLPNMGPLFTPPV
SSVGATLPLASLPTSIAESSAMAPHNFSSLVSNKTADIPGSTLAYQSVSQAISSTVASSS
SAHMDMPVPLLASSGQLLQNAPSMLSSSQSMQTPLQMSSKDFKAVESKTRVVEPLLPDPP
SRALPENNEPILPLPKQTPQKYNGAGSHSNHHYRGRGRGRGSAFSQSVTNFTEEFDFMAM
NEKFNKDEVWGHLGKKSHSRDKDGELGDDVFDEDLEDEETENPELAAKPVYVKDDFFDSL
TSGTFGRGGQNGRSRFSEQRKLDTETFGDFPRHRQPYRGGGRGYRGGGRARGSYYGGRGY
GNMGGRGGQGNSYPHRGSY
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggcggcggaagccccaccgtcgtcgtcgacctcctcctccgcggggccccccgccgcg
gccggctccagcggcggcggggcggcggcctcgccggactcgtacatcgggagcctcatc
agtttgacatccaagagcgagatcaggtacgagggcatcctctacaacatcaacaccgag
gagtccagcatcggcttgcgcaatgttcgatcatttggaaccgaagggcgcaagaaagat
ggagtgcaaattcctgctagcaccaaagtttatgagtacatacttttccggggaagtgat
atcaaggatttgcaagttaagtcatcaccacctccaccgccaccaccacaaccagctgcc
ccgcacaatgatcctgccataatacagtcacactattctcagccagcatcggcttcttca
agtttgccttctgctggaagtgcagtattaccagacctcagctcccaggcagctcaatat
gggcttcagaggccaagttttcagagcaatattcctctatatcaacctgggagtgctcca
tggggatcatctgctccaccttctgctggaaatgcatcaggcctttcagttcccccaatg
tattggcagggatattatccacctggtgggcttccacctcatttgcagcaacctcctttg
ctccagccaggattatcagttccccagggtctccaatatgcaggattgaatcctactcta
tcatcagggccacaaaagctgtcagaactgcagcctcccttgttgcaaccacctggtact
acccaaggcccttcctctggtatcctgcccactacaacagcaccttctgctaacttacta
gctccagaaacttcaaagcctcttctgccgaacatgggccctttgtttactcctccggtt
tcatctgtgggcgccacccttcctttagctagcctgccaacatccattgctgaaagtagt
gcaatggccccacataattttagttcgcttgttagcaataagactgcggatattccaggt
tcaacattggcataccaatcagtgtcacaggcaatttcttcgactgttgcttcatctagc
tcagcccatatggatatgcccgtacctttgttggcatcatcaggtcaactactgcagaat
gctccatcgatgctttcatcatctcagtccatgcagacacctttacagatgagcagcaaa
gatttcaaggcagttgaatcaaaaactagggttgtagaaccattgctacctgatccacca
tcacgtgctcttcctgaaaataatgagcctatattgccattgccgaaacaaacacctcaa
aagtacaatggagctggttcacacagcaatcaccactacaggggccgtggaagaggtaga
ggcagcgcgttttcgcagtcagtaacgaattttactgaagaatttgatttcatggccatg
aatgagaagtttaacaaagatgaagtctggggtcatcttggtaagaaatcccattcaagg
gacaaagatggtgagctgggcgatgatgtgtttgatgaagacctggaggatgaggaaaca
gaaaatcctgagctagctgctaagcctgtttatgtcaaggatgacttttttgattccctc
actagtggaacatttggacgtggagggcaaaacgggaggtcaagattttccgaacagcgc
aaactagatacagagacttttggtgattttccaaggcatcgccagccgtatcgtggtggg
gggcgtggttaccgtggtggcggtcgtgcccgtgggtcatactatggtggcagagggtat
ggaaacatgggaggaaggggtgggcagggtaactcttaccctcaccgtggttcctactga

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