KEGG   Oryza glaberrima (African rice): 127760711
Entry
127760711         CDS       T08853                                 
Name
(RefSeq) uncharacterized WD repeat-containing protein C17D11.16-like
  KO
K14791  periodic tryptophan protein 1
Organism
ogl  Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ogl03009]
    127760711
Ribosome biogenesis [BR:ogl03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    127760711
  Pre-60S particles
   Other pre-60S particles
    127760711
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_RFWD3 Beta-prop_WDR3_2nd Beta-prop_EIPR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_1st EIF3I ANAPC4_WD40 Beta-prop_Aladin WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st WD_LRWD1 Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_WDR75_2nd Beta-prop_WDR41 NBCH_WD40 Beta-prop_DCAF4 Beta-prop_Nup120_160 PALB2_WD40 BBS2_Mid
Other DBs
NCBI-GeneID: 127760711
NCBI-ProteinID: XP_052140970
LinkDB
Position
1:complement(37126731..37131446)
AA seq 487 aa
MISAISWVPRGAAKLVPVEAEPPTQEEIDEAIKAIAQHTEGGSDADEDADDGEENGNMEV
DAAADEEEEEVDEVAQAKAAAKALAKGAVDDVADELKELNMDNYDEEEEGLEIFSSGQGD
LYYASNDLDPYLKNNDEDDDDEEIEDMTIKPTDLMVVCAYNEDDVNSLQVNLLEETEDGD
LNMFVHHEVPLADFPLCTAWMDFNLKGGDKGNFVAVGTMDPAIEIWDLDIVDEVQPHMVL
GGHSKKKKKVKGKKAKKYKKGSHRSSVLGLAWNKEVRNVLASASADKTVKIWDVSVGKCA
VTLEHHDDKVQSVAWSRQSPEVLLSGSFDKSVAMNDMKDGGQSCNKWSVEADVESLAWDP
HNEHSFMVSLENGMVQAFDKRTASSNSNSGRPTFTLHAHEKAVSSISFSPSTPNFLATGS
TDKMVKLWDLSNNQPSCIASLNPKLGAIFSVSFSNDSPFLLASGGSKGKLKVWNTLTEPA
VANKFGK
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgatctccgcgatatcgtgggtgcccaggggcgccgccaagctcgtccccgtcgaggcg
gagccgcccacgcaggaggagatcgacgaggccatcaaggccatcgcccagcacacggaa
ggtgggagcgacgccgacgaggacgccgacgacggcgaggagaatggcaacatggaggtc
gatgccgccgccgatgaggaggaggaggaggtagacgaggtcgcgcaggcaaaggccgcg
gccaaggcgctcgctaagggcgctgtcgatgacgtcgccgacgagctcaaggagctcaac
atggacaactacgacgaggaggaggaaggtctcgagattttcagctccggccaaggggac
ttgtactatgctagcaacgacctggacccctatctcaagaacaatgatgaggatgacgat
gatgaagagattgaagacatgactatcaaacctactgatttgatggtagtttgtgcatat
aatgaggatgatgtcaattcgctgcaggtaaatttacttgaagaaacagaagacggtgat
ctaaatatgtttgtgcaccatgaggtgcctctagctgattttccgttgtgcacagcatgg
atggattttaaccttaagggtggcgacaaagggaatttcgtagctgttggcaccatggat
cctgcaattgaaatttgggacctggatatagtcgatgaagttcaacctcacatggtgcta
ggaggacattcaaaaaagaagaaaaaagtaaagggcaaaaaggcaaaaaagtacaagaag
ggaagtcatagaagttctgtgcttggtcttgcatggaacaaggaggtgaggaatgttcta
gctagtgcaagtgcagacaaaactgttaagatttgggatgtatctgttggcaaatgtgca
gtcacattggaacatcatgatgacaaggttcaatctgttgcttggagccgacagtcgcct
gaagttcttctaagcggatcgttcgataaatcagttgccatgaatgacatgaaagatggt
ggacagagttgtaataaatggtctgttgaagcagatgtagaaagcttagcttgggatccg
cataatgagcactccttcatggttagtcttgaaaatgggatggttcaagcatttgataag
cggacagcctcatcaaattcaaattctggtcgtcccacgtttactctgcacgcacacgag
aaggctgtatcttccatctccttcagtccatctaccccaaattttcttgcgacaggctcg
actgacaaaatggtgaagctatgggatttatcaaacaaccagccatcgtgcatcgcctct
ctgaatccaaaactcggagctattttctcggtatcattttcgaatgacagtcccttcttg
ttggccagcggaggatcaaaagggaaattaaaagtctggaacacactaacggaaccggct
gtagctaataaattcgggaaatag

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