Oryza glaberrima (African rice): 127760826
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Entry
127760826 CDS
T08853
Name
(RefSeq) ABC transporter B family member 11-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127760826
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127760826
04147 Exosome [BR:
ogl04147
]
127760826
04090 CD molecules [BR:
ogl04090
]
127760826
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127760826
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127760826
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127760826
CD molecules [BR:
ogl04090
]
Proteins
127760826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
AAA_30
RsgA_GTPase
Zeta_toxin
DUF87
AAA_21
AAA
AAA_15
Motif
Other DBs
NCBI-GeneID:
127760826
NCBI-ProteinID:
XP_052141086
LinkDB
All DBs
Position
1:18102403..18113047
Genome browser
AA seq
1295 aa
AA seq
DB search
MREGARPSGETTSSVANSGGRSAGGDGHGRRRGAAAAGARVPLRRLFAFADWADAALMAV
GAAAAAANGMAKPLMTFVVGDVIHAFGSAGANSSRRHDGDDDVVARVTKVIMNFIYLGVG
AGLVSALQVSCWTITGERQAARIRALYLKAILRQDIAFFDKEMNTGQLVERMSGDAFLIQ
DAIGEKAGKCIQLLSTFFGGFIIAFVRGWLLALVMLSSIPPVAVAGAIMSRLMVKLTIRM
QAKYGDAGIVVEQTIGAIRTVVAFNGEKKAINTYNKFIKKAYESALQQGVINGLGLGSII
SVFFSSYGLAVWYGSRLIVERGYNGGIVINVIMAIMISAMSLGHATSSITALAGGQGAAY
RLFRTIERQPDIDACCTTGDIFEDVKGDVELKNVYFSYPSRPEHLVFDGFSLQVPSGTRM
ALVGESGSGKSTVISLVERFYDPQSGEVLIDGVDIRRINLGSIRRKIGLVSQEPVLFAGT
IRENITYGKEDPTLEEINRAIELANAAKFIDKLPNGLETMVGERGIQLSGGQKQRIAIAR
VIIKNPRILLLDEATSALDMESERVVQEALNKVMLERTTIIVAHRLSTVKNADMISVLQH
GKLVEQGSHEELMKKPEGSYSKLIHLQETRQEAVAPNDDPDMIIRNDFDSRIINSKTRSQ
NISFRKSTSKSSSFGHSGTHPFTSTCDLSDPMEVHDDQHIKETTDKMSNCQEKASILRLF
SLNKPEAFVLALGSITAAMHGVIFPVFGILVSSAIKMFYEPRSELLKNSRLLGSMFPVLG
ISTFLLIPTEYFLFGLAGGKLVERIRSLTFKSVMYQEISWFDKPENSSGSIGARLSTDAL
NVKHLVGDNLALNFQTLSTIISGFTIAMVANWKLALIITVVVPLVGFQAYAQMMFLKGFN
KNAKSKFEDATQVATEAVGGIRTITSFCAEQKVMNAYEKKCASPIIQGIRDGVVGALGFG
FSFLVFYFAYALCFYVGAKFVHQGTATFGEVFRVFFVLVLGINEISRTSAKGSESRRVNE
SVVSVFKILDRKSKIDSSNDEGVVIASVRGDIEFQNVCFKYPLRPNVQIFKDLSLSIPSG
KTAALVGESGSGKSTVISLLERFYEPDAGRILFDGVELETLKVSWLRLQIGLVAQEPVLF
NDTIRANIAYGKQGDASEEEIIAAAEAANAHQFISGLPDGYNTIVGERGIQLSGGQKQRV
AIARAVIKDPKVLLLDEATSALDSESERVVQEALDRVVVGRTTVVVAHRLSTIKGADIIG
VLENGTIVEKGRHEELMQIKGGIYSSLVELSSSSM
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgagggagggagcgcgaccgagcggggagacgacgtcgagcgtcgccaacagtggaggg
agatcagccggtggcgatggccacggaagaaggcgcggcgccgcggcggcgggggcgcgc
gtgccgctgcgccggctgttcgcgttcgcggactgggcggacgcggcgctgatggcggtg
ggcgcggcggcggcggcggccaacgggatggcgaagccgctcatgaccttcgtcgtcggc
gacgtcatccacgccttcggctccgccggcgctaattcgtctcgtcgtcacgacggcgac
gacgacgtcgtcgcccgagtcaccaaggtgatcatgaattttatctatcttggtgttgga
gcaggacttgtttcagcacttcaagtatcatgctggacaatcactggagagagacaggca
gcacggattagggcgttgtatctcaaagcaatactgaggcaggatattgccttttttgac
aaggaaatgaacactgggcaactagttgagaggatgtcaggagatgcattcctcattcaa
gatgccattggagaaaaggctggcaagtgcatccaactgctttctactttctttggaggc
ttcattattgcgtttgtgagaggatggctgttggcacttgttatgctttcaagcattcct
ccagttgctgtggctggtgcaattatgtcaaggttgatggtaaaactgaccatccgcatg
caagcaaaatatggtgatgctggaatcgtggtcgaacaaaccattggggccattagaaca
gttgttgcattcaatggtgagaagaaagctataaacacatataacaagttcataaaaaag
gcatatgaatctgctctacaacaaggtgttattaatggccttggattaggttccataatc
tcagtctttttttccagctatgggttggcggtttggtatggatctagattgatagtcgag
cgaggctacaatggtggcattgttattaatgttataatggctataatgatcagtgcaatg
tccttaggtcatgcgacatcatcaataacagcccttgcaggaggtcaaggagcagcatat
agactgtttaggacaattgaaagacaaccagatattgatgcatgttgtaccacaggtgac
atatttgaagatgtcaagggtgatgttgaactcaagaatgtgtactttagttatccttcc
agacctgaacatttggtatttgatggattctccttgcaagtaccaagtggcacaagaatg
gccctagttggagaaagtggcagtgggaaatcaactgttatcagtttggtggagagattc
tatgatccacagtctggggaagtgttaattgatggagttgatattagaagaataaatctt
ggatcgataagaagaaaaattggtcttgtcagccaagaaccagtgctgttcgcaggtaca
atcagggaaaatatcacgtatggaaaggaggacccaactcttgaagaaatcaatagagca
atcgagcttgcaaatgcagcaaagttcattgataagttgccaaatggtcttgaaacgatg
gttggtgagcgtggaattcaactgtctggaggtcagaagcaaagaatagcaattgctaga
gtgattataaaaaaccctaggatcttactgcttgatgaagcaactagtgcattggatatg
gaatctgagagggtagttcaagaagccttgaataaggtaatgttagaaaggacaacaatt
attgttgcacatcgcctgagcacagtaaagaacgccgatatgatatctgttctacagcac
gggaagctggtggagcaaggttcacatgaagaattgatgaagaagcctgaaggttcttac
tctaagctgattcatctccaggagactcggcaggaagctgtggcacctaatgatgaccct
gatatgataataagaaatgattttgactctaggattataaatagcaaaacaagaagccaa
aatatctcatttaggaaatcaaccagtaaaagctcctcttttgggcacagtggtacccat
cctttcacatctacttgtgacttatctgatcccatggaggtccacgatgatcagcacata
aaggagaccacagataaaatgtctaattgccaagagaaagcttcgatcctccgcctcttc
tctctgaacaagccggaggcctttgttcttgcacttggttctataactgctgcaatgcat
ggagtcatttttcctgtattcggcatactggtttcaagtgcaataaagatgttttatgaa
ccacgttcagaattactgaagaactccaggttattgggcagcatgtttccggtgcttgga
atttccacatttcttcttattccaacagagtacttcctatttggactagcaggtgggaag
cttgtggagcgcatacgatcattgacatttaaaagtgtcatgtaccaggagatcagctgg
tttgataaacctgaaaactctagtggatcaattggtgcaaggctatctactgatgctttg
aacgtgaagcacctcgttggggacaatttggcactaaatttccagactttgtcgaccata
atatcaggttttacaatagcaatggtagcaaactggaagctggcattgattataacagtg
gtagttcctttggtgggtttccaggcctatgctcaaatgatgttcctgaaaggtttcaac
aaaaatgcaaagtcaaagtttgaagatgcaactcaagtagcaactgaggcagttggaggc
atcagaaccatcacgtcgttctgtgctgaacagaaggtgatgaacgcctatgagaagaaa
tgtgcatctccaataattcaaggaataagggacggagttgttggtgccttgggttttggc
ttctccttccttgtgttctactttgcgtatgctctctgcttttatgtcggagcaaagttt
gttcaccaaggaacagcaacattcggggaagtgtttagggtcttcttcgtgttagttttg
ggtattaatgaaatctcacgaacaagtgcaaaaggatcagaaagcagacgtgttaatgaa
tcggtagtttctgtcttcaaaattcttgatcgtaaatccaagattgattcgagcaatgat
gagggtgtggtcattgcaagtgtcaggggtgacattgagttccagaatgtgtgttttaag
taccccttgcgcccaaatgttcagatcttcaaggatctatccttgagcattccttctgga
aagactgctgcgctggttggggagagtggaagcgggaagtctacggtgatttcactgctt
gagaggttctatgaacctgatgctggcaggatcctttttgacggtgtggagcttgagact
ctcaaagttagctggcttcgtctacagattggccttgtggcgcaggaaccggtattgttc
aacgacaccatccgtgcgaacatagcttatgggaagcaaggtgatgcatctgaagaagag
atcattgctgctgctgaagcagccaatgcgcaccagttcatctccgggctgcctgatggg
tacaacaccattgttggcgaaagagggatccaattgtcaggtgggcagaagcagcgtgtc
gccatagcgagagccgttataaaggaccccaaggtgctgctgctggatgaggcaacaagt
gctctggattcagaatcagagcgcgtggttcaggaggcgctggaccgggtggtggttggt
aggactaccgtggtggtggcgcatcgcctgtcgacaataaaaggagcggatatcatcggt
gtcctcgaaaacgggacgatagtggagaaaggcaggcatgaagaactgatgcagataaag
ggtggaatatattcttcacttgttgagcttagctcaagctcaatgtaa
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integrated database retrieval system
