Oryza glaberrima (African rice): 127761107
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Entry
127761107 CDS
T08853
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase NSUN5
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogl03009
]
127761107
Enzymes [BR:
ogl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
127761107
Ribosome biogenesis [BR:
ogl03009
]
Eukaryotic type
Other ribosome biogenesis factors
127761107
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_N
NSUN5_fdxn-like
Methyltransf_25
Ubie_methyltran
FtsJ
Methyltransf_31
RsmF-B_ferredox
Methyltransf_4
ASPP2-like_RA
PCMT
Motif
Other DBs
NCBI-GeneID:
127761107
NCBI-ProteinID:
XP_052141292
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All DBs
Position
2:6461873..6467003
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AA seq
505 aa
AA seq
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MPPPPPSKNRGHVPAPRPPPGKPPGRRMASRDAAERAAFFARREAAAVLRRVLRGDASRR
AAGSIKSLVYSPSVRNKRATFALVCQTLKYLPILKEVLASTGVLTSKWKKQEELVFVTAY
DILFGQETAASGSVEQLIMLHKDTIMAALEKMCIRRKVRSVEDLVSKKRTVKPKPRFLRV
NTLRTSTDSVIEELNKIHKVDKDELVPDLLVLPPGTDLHNHHLVSEGEVFLQGKASCMVA
VALCPEPGWKVIDACAAPGNKTVHLAALMNGEGSITACELNKERTKTLQNTIRRSGANNI
ETINGDFLDIDSNDPSYAEVRAILLDPSCSGSGISTERLDHLLPSHSRGNQDDASTSSRI
RKLSAFQRKALSHALSFPSVERVVYSTCSIHQAENEDVVSSVLPLASSLGFELATPFPQW
RRRGLPVFEGSEHLLRTDPEDGLEGFFISLFVRKAAAAADAVKPSNGGLGVSKQVFKRRN
GLMAFGSSRLSRMMMLCSTRGLSRR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgccgccgtcgaagaaccgcggccacgttcccgcgccccggccgcctccg
ggcaagccgcctgggcgacggatggcgagccgggacgcggcggagcgggcggcgttcttc
gcgcggcgcgaggcggccgcggtgctccgccgcgtgctccgcggggacgcgtccaggcgc
gccgcgggctccatcaagtcgctcgtgtactccccctccgtccgcaacaagcgcgccacc
ttcgccctcgtctgccagaccctcaagtatcttccaattctaaaggaggttttagcatca
actggagtactaaccagtaaatggaagaaacaggaagaattagttttcgtgactgcctat
gacattctctttggtcaggagacagcagcttctggatccgttgaacagttaattatgtta
cataaggatactattatggctgctcttgagaaaatgtgtattagaaggaaggttcgtagt
gttgaagacttagtaagcaagaaaaggacagtcaaaccaaaacccaggtttcttcgtgtt
aacacactcaggaccagtacagattctgtcatcgaagaactgaacaaaatacacaaggtt
gataaagacgaattggttccggacttgttggtgctcccacctggaactgatttgcataac
caccatttggtctcagaaggagaagtatttttacaggggaaagcaagttgtatggtggca
gttgcattatgccctgagccaggctggaaggttattgatgcatgtgcggctccagggaat
aaaacagtccatcttgctgcactcatgaatggagaggggagtattacagcttgtgaactt
aataaagagaggaccaagactttgcaaaatactatccgaagatccggagcaaacaatatt
gaaacaatcaatggtgactttttggatatcgatagcaacgatccatcatatgcggaggtc
cgagctattctattagatccctcttgctctggttccggaatctctacagagagacttgac
catttgctcccttcgcactcaagaggtaatcaggatgatgcaagtacgagttcaaggata
aggaaactctccgccttccagaggaaagcgctctcacatgctctgtcattcccctctgtg
gagagagtggtctacagcacctgctcaatccaccaagctgagaacgaggacgtcgtgagc
tccgtcctgccattggcgtcatcgctcggattcgagctcgctactccattccctcaatgg
cgacgccgtggtctccccgtctttgaaggatctgagcatctgcttcggacggacccggag
gacggcctggagggcttcttcatatcgttgttcgtgaggaaagcagcagcagcagccgat
gctgtaaagcctagcaatggtggtttgggagtgagcaagcaggtttttaagagacgtaac
gggctcatggctttcggctcatcgagactgtccaggatgatgatgctctgctctacccgg
ggtctctcgagaagatga
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