Oryza glaberrima (African rice): 127761151
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Entry
127761151 CDS
T08853
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127761151
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogl04040
]
127761151
Ion channels [BR:
ogl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127761151
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
DUF6525
Motif
Other DBs
NCBI-GeneID:
127761151
NCBI-ProteinID:
XP_052141351
UniProt:
I1P4Q8
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Position
2:31404071..31415302
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AA seq
772 aa
AA seq
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MSDQERDDIPMLLRNVELPTFPPRSTSMCIPVRDDEYEEDTFVPHTGPLFVQPPTQTAAA
GIPFTNTPDMPPRPPQGKQVNKPHAIMPEEIGGNRWSYSGNVPKNEHLMMSGPLGQCDDP
DCVNCPPACKNKRHFHRGSSTLDSKFHNFLCEHGGGWKKEIERFLSRIPVMNPHAKVVQQ
WNQFFVISCLVAIFIDPLFFFLLSVQKDNKCIVLNWHFATALAVVRSVTDAIYFLHMLLQ
FRLAYVAPESRVVGAGDLVDEPKKIAVHYLRGYFLLDFFVVLPLPQVMILLVIPKYVGLS
TANYAKNLLRITVLLQYVPRIIRFVPLLGGQSDSSANGFIFESAWANFVINLLMFVLAGH
VVGSCWYLFGLQRVNQCLRNACSASKIPSCDGFIDCGRGINIGKQNQLSRQQWFNDSAST
ACFDTGDNGFHYGIYEQAVLLTTEDNAVKRYIYSLFWGFQQISTLAGNLVPSYFAWEVLF
TMAIIGLGLLLFALLIGNMQNFLQALGRRRLEMQLRRRDVEQWMSHRRLPEDLRRRVRRA
ERFTWAATQGVNEEELLSNLPEDIQRDIRRHFFRFLNKVRLFTLMDWPILDAICDKLRQN
LYISGSDILYQGGPVEKMVFIVRGKLESISADGSKAPLHEGDVCGEELLTWYLEHSSANR
DGGRMRFHGMRLVAIRTVRCLTNVEAFVLRASDLEEVTSQFSRFLRNPRVQGAIRYESPY
WRTIAATRIQVAWRYRNRRLKRAGMSKLNDQSYNSALERGARECDARQHGRV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccaggagagagatgatattcctatgctactaagaaatgttgagctaccaacg
tttcctcctagaagtacatcaatgtgcataccagttagggatgatgaatacgaagaagac
acatttgtaccccatactggtcctctgtttgttcagccaccaacacaaactgcagcagcg
ggcattccatttacaaatacaccagatatgcctcctcgacctccacaaggaaaacaagtc
aacaagccacatgcgataatgccagaagaaattggaggaaacaggtggtcttatagtggg
aatgttccaaagaatgaacatttgatgatgtctggacctttgggacaatgtgacgatcct
gattgtgtcaactgccctcctgcttgtaaaaacaaaaggcattttcacagaggatcaagt
acattggacagtaagttccataattttctttgtgagcatggtggtggatggaagaaggaa
attgagcgtttcctttcacgcattccagttatgaacccacatgcaaaagttgttcagcaa
tggaatcagttctttgtgatatcatgcctggttgccatattcattgacccactatttttc
ttcctattatcagttcaaaaggataacaagtgcattgtgttgaactggcattttgctaca
gcacttgcagttgtgagaagcgtgactgatgctatttattttctacacatgcttcttcag
ttcagactggcttatgtagctccagaatcgcgagtagtgggagctggagatttagtagac
gagccaaagaaaattgctgtccattatcttcgtggatattttttactcgacttcttcgtt
gtgcttccactccctcaggtgatgatattgctggtcatccctaaatatgttgggttatca
actgcaaactatgctaagaatttattgcgtatcactgttcttcttcagtatgttccccgc
atcatcagatttgtaccattgcttggtggtcagtctgactcatctgccaatggattcata
ttcgagtcagcgtgggctaactttgtgattaaccttctaatgtttgttttggcgggacat
gttgttggttcatgttggtacctatttggattgcagagggtcaaccaatgcctacggaat
gcttgttctgcatcaaaaattccatcttgtgatggttttatagattgtggacgtggcatt
aatattgggaagcagaatcaactaagcagacagcagtggtttaatgattcagcctcaaca
gcttgtttcgacactggagacaacggtttccactatgggatttatgaacaggctgttttg
ctaactacagaggacaatgctgttaaacgttatatatattcattattttggggtttccag
caaataagtacgctagctggtaatcttgtcccaagttattttgcatgggaagtcctgttt
actatggctattattggtttggggctgttgcttttcgcattacttattgggaacatgcaa
aattttctccaagctcttggaagacggagactagaaatgcaacttaggaggcgtgatgtt
gaacagtggatgagccatagacgcctgccagaagatttaagaaggagggttagacgcgca
gaaaggttcacctgggcagctacccaaggggtgaatgaagaggagcttttaagtaattta
ccagaagatattcaaagggacatacgccgtcatttctttagatttcttaacaaggtccga
ttattcacattgatggattggcctatcttggatgctatatgtgacaaactaagacaaaac
ttgtatattagcggcagtgacatcctttatcaaggtggtccagttgaaaaaatggtcttc
atagtgaggggaaagctagaaagcatcagtgcagatggaagcaaagctccgttacatgaa
ggtgatgtatgtggagaggagctcctgacatggtacttggaacactcttcagctaacaga
gatggtgggagaatgagattccatggtatgcgtttggttgctattcgtactgtaagatgt
ttaacaaatgttgaagcttttgtactaagggcaagcgatctcgaagaagtaacttcacaa
ttttcacgattcttgcgcaatccacgagtgcagggtgcaatcaggtatgagtcaccctac
tggagaaccattgctgcaacgcgtattcaagtcgcatggaggtatcggaataggcgattg
aagcgagctgggatgtcgaagttgaacgatcaatcttataattctgcattggaacgtggc
gcgcgtgaatgtgatgctcgtcagcatgggcgggtatga
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