Oryza glaberrima (African rice): 127761162
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Entry
127761162 CDS
T08853
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
127761162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127761162
DNA repair and recombination proteins [BR:
ogl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
127761162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
IMS_C
Motif
Other DBs
NCBI-GeneID:
127761162
NCBI-ProteinID:
XP_052141363
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All DBs
Position
2:10899322..10901933
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AA seq
722 aa
AA seq
DB search
MPRPAASSSSRPPPEGEPASSRATSSAESSIASLIDRATSTTSPSVDPALLRAIKSAARA
SDGAIRDAFRILLSLMSKPHAHVRLLAFTIADELFMRSKLFRSLLADVLDGFLPLAVGFR
RAHPLPPPAASATLLRKAAVQALERWHHLFGAHYRQLRLAVEYLKESARVQFPGLRAAVE
ARAAREARTQEILTAKVEQLRRNLAAIKAEIRSVIDEIHNGLDIIRIESEKFNNYANDED
EEKGIASLAMRSIRMASLIAGEWVPETQENEAVFDALRESYRLLVSKHLVTVQEWISVLV
RVNLADNRFRDSALKEFIDVKNEIRAVRNQCSELGLNLDNVHRRKGVQEEEDDDFWVEGN
IEVPSPGRVGTSADVASSSKDTRKGKKPVGGTDTDDVKAPNAGNSPQELDPERAKLHAEA
PVLPWSSVLDRWGSNRDALVNQRGLELESHWGRVDNDAVIPAAKIAELNVHSSIYREDPV
EILPCLAPLKKGGLCQRRDLKICPFHGPIVPRDAEGNPIHQSDGHCDAEGNPVGQTDGRY
DAAVSPIDPNEDSSDVRENMIMPDGSSDGECIYESSPSRTANINNDISDSDVGHDLGKIT
VEQLARQAVQNVRKRDRDDKKALEKAQRARIRQHNQDVLREAALASTSRSAADYDLPSPA
VSRRGRQGKTKGPTLASMLKKKVTSKDRIAERLLNARARDATIREVSHTEDMSYREAFPN
QW
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccccgccgcctcctcctccagccgccctccgccggaaggcgagccggcctcg
agccgcgcgacctcctctgcggagtcctccatcgcgtccctcatcgaccgcgccacctcc
accacctccccctccgtcgacccggccctcctccgcgccatcaagtccgccgcccgcgcc
tccgacggcgccatccgcgacgccttccggatcctcctctccctcatgtccaagccccac
gcccacgtgcggctgctcgcgttcaccatcgccgacgagctcttcatgcgctcgaagctc
ttccgctccctgctggccgacgtgctggacggcttcctcccgctcgccgtcggcttccgc
cgcgcccacccgctcccgccgcccgccgcctccgcgaccctgctccgcaaggccgccgtc
caggcgctcgagcgctggcaccacctgttcggcgcgcactaccgccagctccgcctcgcc
gtcgagtacctcaaggagtccgcccgggtccagttccccggcctccgtgccgccgtcgag
gctcgtgccgcgcgggaggctcgcacgcaggagatcttaactgcaaaggtcgagcagttg
cgccgaaacctggcggcgattaaggctgaaatccgctccgtgattgatgagatccacaat
gggttggatatcattcgcatcgagagtgaaaaatttaacaattatgcaaatgatgaggat
gaggagaaggggattgcctctttggcgatgcggagtattaggatggcttctttgatcgct
ggggagtgggttcctgagactcaggagaatgaagcagttttcgacgcgttgagggagtca
tatcggctccttgtgtcaaagcatttggtcacagttcaggaatggatatctgtgctggtt
agggtcaatctcgcagataatcgtttcagagattctgctttgaaggaattcattgatgtt
aagaatgaaatacgagcagtgagaaatcagtgtagtgagcttggtcttaatcttgacaat
gtccataggcggaagggtgttcaggaggaagaggatgatgacttttgggttgaggggaat
attgaggttcctagccctggtagagtaggtaccagtgcagatgttgcaagtagcagcaag
gacactagaaagggaaagaagccagtaggtggcacggatactgatgatgtcaaggcacct
aatgctggcaatagtcctcaagagctggatccagagagggcaaagctgcatgcagaagcc
cctgtgctgccatggagctctgttttggatcgttggggttcgaacagggatgcacttgta
aaccaaaggggacttgagctcgagagccattggggaagggtggataatgatgctgttata
cctgctgcaaagattgcagaattaaatgttcatagttcaatatatagagaagatccagtt
gagattctaccatgccttgcacctctgaagaaaggaggcctttgccagagaagagatctc
aagatatgcccgtttcatgggcctattgttccacgagatgccgaaggaaatccaattcat
cagagtgatggccattgtgatgcagaaggaaatccagttgggcagactgatggccgttat
gatgcagcagtaagtcctattgatccgaatgaagacagttctgatgtaagagaaaatatg
attatgccagatggaagcagtgatggtgaatgtatttatgagtcctctccttcaagaacg
gcaaacataaataatgacattagcgacagcgatgtaggtcatgacctcggtaaaattaca
gtggagcagttggcgagacaggcagtgcagaatgtccggaaaagagacagggatgacaaa
aaagctctggaaaaagcccaacgagcgagaattcgtcagcataatcaagatgttttgcgg
gaagcggctcttgcttcaacctcgcgctcagcggcagactatgacctcccttcgccagca
gtgtctcgacggggacgccaaggtaagacaaagggaccaacactggcatcgatgctgaag
aagaaagttacttccaaagatagaattgcagagaggcttctgaatgctcgagctagggat
gcgacaataagagaagtttcacatactgaagatatgagctacagagaagcattcccaaat
caatggtag
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integrated database retrieval system
