Oryza glaberrima (African rice): 127761221
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Entry
127761221 CDS
T08853
Name
(RefSeq) heparanase-like protein 3 isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00531
Glycosaminoglycan degradation
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
127761221
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ogl00536
]
127761221
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
127761221
Glycosaminoglycan binding proteins [BR:
ogl00536
]
Heparan sulfate / Heparin
Enzymes
127761221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
127761221
NCBI-ProteinID:
XP_052141438
UniProt:
I1P589
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All DBs
Position
2:32918025..32924359
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AA seq
541 aa
AA seq
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MAAGLLLKLVGFCFWAVFWLGGAATVSTNAGGEAAAAAVVVDARSAIAVTDEDFVCATLD
WWPPDKCDYGTCSWGLATLLNMDLSNKILLNAVKAFSPLKLRLGGSLQDVLIYDTGDPRQ
PCTPFTKNSSAMFGFTQGCLPLHRWDELNAFFQKSGAKIIFGLNALNGRVPMSDGSLGGP
WNYTNAASFIRYTVSKGYDIHGWELGNELSGSGVGARVDADQYAQDVLALKQIIDNSYQG
HASKPLVIAPGGFFDAAWFTELISRTKPNQMDVMTHHIYNLGPGVDTHLIDKILDPSYLD
GEAGTFSSLQGILKSAGTSTVAWVGEAGGAYNSGHHLVTDAFVFSFWYLDQLGMSSKYDT
KTYCRQTLIGGNYGLLNTTTFEPNPDYYSALLWNRLMGTKVLSATFNGTNKIRAYAHCAR
DSRGITLLLINLSGNNTNHIYVTSEGVQPYSTKKEGRRRFGRIPGLGEEAQLIREEYHLT
PKDGSLQSQHVLLNGNVLAPDANGEIPKLEPVQVEGTQPITVAPYSIVFAHIPRFYAPAC
R
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggggctactgctgaagctggtcgggttctgcttctgggccgtcttctggctc
ggcggcgccgccaccgtcagcaccaacgccggcggcgaggcggcggcggcggcggtggtg
gtggacgcgcggtccgccattgctgtgacggacgaggacttcgtgtgcgcgacgctggat
tggtggccgccggacaagtgcgactacggcacctgcagctggggactcgccaccctcctc
aacatggatctttcaaacaaaatcctgttgaatgccgtcaaagcattctcacctctgaag
cttaggctgggaggatccttgcaggatgtgttgatatacgacaccggcgatcctcggcag
ccgtgcactcctttcacgaagaactcatcggccatgttcggtttcactcaaggttgcctg
ccgttgcatagatgggacgagctcaatgcattcttccaaaaatcaggagcaaaaattatc
tttgggctgaatgctctgaatggtagggttccaatgtctgatggttctttaggagggcca
tggaattacaccaatgcggcttccttcattcgctacactgtcagcaagggctatgatatc
catggatgggaactcggaaatgaactcagtggcagtggggttggagctcgagttgatgca
gaccaatatgcacaagatgttctagctctgaaacaaatcattgacaactcctaccaaggc
catgcatcaaagccactggtgattgcaccgggaggtttctttgatgcagcctggttcact
gagcttatcagcagaacaaagccaaaccagatggatgtgatgactcaccacatctacaat
ctaggccctggcgtcgacacgcacctgattgataaaattcttgacccgtcttacctcgac
ggcgaggccggcacattcagcagtctccaggggatactgaagtctgcagggacgtccacc
gtcgcgtgggtcggcgaggctggaggcgcttacaacagtggtcaccaccttgtaactgat
gcttttgtgttcagcttctggtacttggatcagctaggaatgtcatctaagtatgacaca
aagacctactgcagacagaccttgattggagggaactatggtctgctcaacacaacaacg
tttgaaccaaatcctgattactacagtgctttactatggaaccgcctcatgggaaccaag
gttctctcggcaacattcaacggcaccaacaagatccgcgcttacgcacattgcgcaaga
gattcacgtgggatcactctactcctgatcaacctcagtggcaacaacacaaaccatatc
tacgtgacgagcgaaggcgtgcaaccttacagcacaaagaaggagggccgcagaaggttc
ggacgcatcccggggctcggcgaagaagctcagctcatcagagaagagtaccatctcacc
cccaaagatgggagccttcagagccagcatgtgctgctgaatggcaatgtgttggcacct
gatgccaatggagagatccctaagctggagcctgtgcaggtggagggaacacagcccata
acagtggctccttactccattgtgtttgctcatattcccagattctatgctcctgcctgt
aggtag
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