Oryza glaberrima (African rice): 127761458
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Entry
127761458 CDS
T08853
Name
(RefSeq) probable pyridoxal 5'-phosphate synthase subunit PDX2
KO
K08681
pyridoxal 5'-phosphate synthase pdxT subunit [EC:
4.3.3.6
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00750
Vitamin B6 metabolism
ogl01100
Metabolic pathways
ogl01240
Biosynthesis of cofactors
Module
ogl_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
127761458
Enzymes [BR:
ogl01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
127761458
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Motif
Pfam:
SNO
GATase_3
BPL_N
DJ-1_PfpI
Peptidase_S51
GATase
Motif
Other DBs
NCBI-GeneID:
127761458
NCBI-ProteinID:
XP_052141710
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Position
2:complement(1422085..1425524)
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AA seq
255 aa
AA seq
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MAVVGVLALQGSYNEHLAALRRIGVRGVEVRKPEQLQGLDSLIIPGGESTTMAKLANYHN
LFPALQEFVGTGRPVWGTCAGLIFLANKAVGQKSGGQELIGGLDCTVHRNFFGSQLQSFE
TELSVPMLAEKEGGSDTCRGVFIRAPAILDVGSDVEVLADCPVPSDRPSITIASGEGVEE
EVYSKDRVIVAVRQGNILATAFHPELTSDSRWHRFFLDMDKESDTKAFSALSLSSSSRDS
QDGSKNKPLDLPIFE
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgtcggcgtcctcgcgctgcagggctcctacaacgagcacttggccgcgctg
aggaggatcggggtgaggggggtggaggtgcggaagccggagcagctgcaggggctcgac
tcgctcatcatccccggcggcgagagcaccaccatggccaaactcgccaactaccacaac
ctgtttcctgcacttcaagaatttgttggtacaggaaggcctgtctggggaacttgtgct
ggactcatcttcctagctaacaaggcagtaggccaaaaatccggaggtcaggagcttatt
ggaggactagattgtactgtccaccggaacttttttgggagccagcttcaaagctttgaa
acggaactttcagtgccaatgcttgcagagaaggaaggagggagcgatacatgccgtggc
gtatttatacgagcacctgctatcttggatgtaggttcagatgttgaagtactggcggat
tgtcctgttccatcggatagacccagtattacaatagcgtctggagagggtgttgaggaa
gaagtgtactcgaaagatcgggtaattgttgctgtaaggcaagggaacatcctcgctact
gcttttcacccagaattgacatcagactctagatggcatcggttcttcctggacatggat
aaagaatctgatacaaaagccttctctgctctctctctctcatcatcttcaagagacagt
caagatgggtcaaagaataagcctcttgatctacccatctttgagtag
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