Oryza glaberrima (African rice): 127761838
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Entry
127761838 CDS
T08853
Name
(RefSeq) two-component response regulator ORR24
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127761838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127761838
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
127761838
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
NOA36
Motif
Other DBs
NCBI-GeneID:
127761838
NCBI-ProteinID:
XP_052142130
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Position
2:complement(4292593..4297196)
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AA seq
626 aa
AA seq
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MTVEERQGRVGGHGVSGGGGGRDQFPVGMRVLAVDDDPTCLKILENLLLRCQYHVTTTGQ
AATALKLLRENKDQFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGETQTVMKGI
THGACDYLLKPVRLEQLRTIWQHVIRRKNCDAKNRGNDDDAGQKAQGMNNEGESIGANRN
KRQSRKSRDENGDDGDDSDENSNENGDSSTQKKPRVVWSVELHRKFVAAVNQLGIEKAVP
KKILDLMNVENITRENVASHLQKYRLYLKRLSTDASRQANLAAAFGGRNPAYINMNSFGN
YNAYGRYRTVPTAGHTQANNILTRMNSPSAFGVHGLLHSQPIQLGHAQNNLSTSLNDLGG
LNNGNMIRGAQMSTILTGPSGNSFPNISNGAPLATANRSLQPLESSNQQHLSRVHSSSAD
PFSTLVGESPQFPDLGRTTNTWQTAVPSNIQDRGHNDNMSQATLHMNGPKIEPVSSFTSS
NQIPLLGNEMQGQVASLASNVPIAFNQDTSPFNYGSSTNSRDMLNNSHVFSNSSINTSLP
NLSLDNPAVPRQTLDRGNTGIVSPIQDGRIHHQAVSNQLNYNDDLMRTTGLQRGLSGGLD
DIVVDMFRPDREDDGVPYIDGDWELV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggaggagaggcaggggagggtgggaggccatggtgtgagcggcggcggcggc
gggagggaccagttcccggtcggcatgcgggtgctcgccgtcgacgacgaccccacctgc
ctcaagatcctcgagaacctcctgcttcgatgccagtatcacgtgacaacaactggtcag
gcggccacggccctgaagctgctcagggagaacaaggaccagtttgacctggtgatcagc
gacgtccacatgccggacatggatggcttcaaactccttgagcttgtcggcctcgagatg
gacctcccagtcattatgttgtctgcgaacggggaaacacaaactgtcatgaagggtata
acccatggtgcatgtgactatcttctgaagccagtgcgtcttgagcagctaaggacgata
tggcaacatgtgattaggcgtaagaattgtgatgctaagaaccgtggtaacgatgatgac
gctggtcagaaggcacagggaatgaacaatgaaggtgagagtattggtgctaaccgcaac
aagaggcagtcacggaaaagtagagatgagaatggagatgatggtgatgattctgatgag
aacagtaatgagaatggagactcatcaacacagaagaagccaagggtcgtgtggtctgtt
gagctgcaccgaaagtttgtggctgctgttaaccagcttggcatcgagaaggctgttcca
aagaaaatattggatctcatgaatgtagagaacatcaccagggagaatgttgctagtcat
ttgcagaagtatcggctgtaccttaaacggttgagcactgatgcaagcaggcaggctaac
cttgcagctgcatttggaggaaggaaccctgcttacataaacatgaattcatttggaaac
tacaacgcatatggtagataccgtacagtcccaactgctggccatacccaggcaaacaac
attcttactaggatgaactccccttctgcgtttggtgttcatggtttgctgcattcacag
ccaattcagttaggacatgcccaaaataatctgagcacttcactgaatgatttaggaggg
cttaataatggtaacatgatcagaggtgcacagatgtcaacaattctaactggtccttct
ggtaactcctttccaaacatatcgaatggtgcaccgctggcaactgcaaacagatcactg
caacctcttgagtcgagcaatcagcaacaccttagtcgggtgcattcatcttctgcagat
ccatttagcacacttgttggtgagtctccccagtttcctgatcttggaagaaccaccaat
acttggcaaactgcggttccatccaacattcaggatcgtggtcacaatgataacatgtcg
caagccaccctgcatatgaatggccccaaaattgaacctgtctcaagcttcacatcatcc
aatcagattccgctgctgggaaatgagatgcagggccaagtagcatcactggctagcaat
gttccaatagcattcaatcaggacacatcaccattcaactatgggagcagcacaaactca
agagacatgctaaataacagccatgtatttagtaactccagcatcaacacgtcgttgccc
aaccttagcttagacaatccggctgtaccaaggcagacactggatcgtgggaatacgggc
attgtttctcccatacaagatggaaggattcatcaccaagctgttagcaatcagctaaac
tataatgacgatcttatgcggacaactgggctgcaaaggggtctcagtggtggtctagat
gacattgttgttgacatgtttaggccggaccgcgaagacgacggcgttccttacatcgat
ggggactgggagctggtctag
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