Oryza glaberrima (African rice): 127761881
Help
Entry
127761881 CDS
T08853
Name
(RefSeq) chaperone protein ClpD1, chloroplastic
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ogl03110
]
127761881
Chaperones and folding catalysts [BR:
ogl03110
]
Heat shock proteins
HSP100
127761881
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA_5
AAA
Clp_N
AAA_22
Sigma54_activat
AAA_16
nSTAND3
NBD_SMAX1
AAA_18
IstB_IS21
AAA_7
AAA_14
NACHT
ATPase_2
AAA_25
Zeta_toxin
Torsin
YkoP
Motif
Other DBs
NCBI-GeneID:
127761881
NCBI-ProteinID:
XP_052142177
LinkDB
All DBs
Position
2:18966711..18971772
Genome browser
AA seq
938 aa
AA seq
DB search
MEVCCCSTSSAVPGRRFAAAGAAAAAVAARWGAVGVGRAVVLAHPLRPAPRGGHAHAQQA
GARRARRAVVRAVFERFTERAVKAVVLSQREAKGLGEGAVAPRHLLLGLIAEDRSAGGFL
SSGINIERAREECRGIGARDLTPGAPSPSGSGLEMDIPFSGSCKRVFEVAVEFSRNMGCS
FISPEHLALALFTLDDPTTNSLLRSLGADPSQLASVALTRLQAELAKDGREPAGASSFKV
PKKSPAGAGRSAFSKSLNSKKEKGALDQFCLDLTTQASGGFIDPIIGREEEIERVVQIIC
RRTKNNPILLGEAGVGKTAIAEGLALRIANGDVPIYLVAKRIMSLDVGLLIAGAKERGEL
ESRVTSLIREVREAGDVILFIDEVHNLIGSGTVGKGKGAGLDIGNLLKPPLARGELQCIA
ATTLDEHRMHFEKDKALARRFQPILVEEPSQDDAVKILLGLREKYETYHKCKFTLEAINA
AVYLSARYIPDRQLPDKAIDLIDEAGSRARMESFNRKKEGQSSILLKSPDEYWQEIRAAQ
NMHEVVSSNQMKYSPRQENGSAAIKAPSEDMNELTSELQVEEPIVVGTEEIARVASLWSG
IPVQQLTADDRKLLVGLDDELRKRVIGQDDAVMAISRAVKRSRVGLNDPDRPIATLLFCG
PTGVGKTELTKALAASYFGSESAMLRLDMSEYMERHTVSKLIGSPPGYIGYGETGTLTEA
VRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLSDSQGRRVSFKNTLIVMTSNVGSTSI
SKGRRSMGFMTEDTESSSYVAMKSLVMEELKAFFRPELLNRIDEMVVFRPLEKTQMLAIL
DIILQEVKGRLLALGIGLEVSDAMKDLICEEGYDKSYGARPLRRAVTHLIEDVISEAILF
GEYKPGDTILMDIDAAGKPCMSHLNEKVVQLSDPTRTF
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtgctgctgctcgacgtcgtcggccgtgcccgggaggaggttcgcggcggcc
ggggcggcagcggcggcggtggcggcgaggtggggcgccgtgggggtcgggagggcggtg
gtgctggcgcacccgctgcgcccggcgccgcgcggcgggcacgcgcacgcgcagcaggcg
ggcgcgcggcgggcgcggcgcgcggtcgtcagggcggtgttcgagcggttcacggagcgg
gcggtgaaggcggtggtgctgtcgcagcgggaggccaaggggctcggggagggcgccgtg
gcgccgcgccacctgctgctggggctcatcgccgaggaccggtcggcgggcgggttcctc
tcgtcggggatcaacatcgagcgcgcgcgcgaggagtgccgcggcatcggcgccagggac
ttgacccccggcgcgccgtcgccgtccggctccgggctggaaatggacatacccttctcc
ggcagctgcaagcgggtgttcgaggtcgccgtggagttctcccggaacatgggctgcagc
ttcatctccccggagcacctcgccctcgcgctcttcaccctcgacgatcccaccaccaac
agcctcctcaggagcttgggagcggatccgagtcaactagcatcagtagcgcttacccga
ctccaagcggagcttgcgaaagatggcagagaacctgcaggagcatcatctttcaaagta
cccaagaaatctcctgctggagctggaagatctgccttctcgaaatctttaaattcaaag
aaagaaaagggtgcgcttgatcaattttgtttagatctgaccacacaagctagtggcggg
tttattgatcctatcattggccgtgaggaggagattgaaagagtagttcagataatatgc
cgacggacaaagaacaatcctattcttttgggtgaggcaggtgttggcaaaactgcaatc
gctgaagggttggctcttcgaattgcaaatggagatgtccccatttaccttgtggcaaag
cgtataatgtcattggacgttggtctacttattgctggtgcaaaagaaagaggtgaacta
gagtccagggttactagtttaattcgtgaagtccgggaagcaggggatgttattcttttc
attgatgaggttcacaatcttattggatctggcactgttggaaagggtaagggtgctggc
cttgacattggcaacttgctgaagcccccacttgctagaggtgaattgcagtgcattgca
gctacaactctagatgaacacagaatgcattttgagaaggataaggctttggctcgccgc
ttccagccaatattagtagaggagcctagtcaggatgatgctgtgaagatattacttggt
cttcgtgaaaaatatgaaacatatcacaaatgcaaatttaccttagaagccatcaatgca
gcagtttatctgtcagcaagatatattcctgacaggcagctccctgacaaggccatcgat
ctgattgatgaagctggcagtagagctcgaatggaatcatttaataggaagaaggaaggg
cagtcttcaatcctcttaaagtcgccagatgaatactggcaagagataagagctgctcaa
aacatgcatgaagtggtgtcatcaaaccagatgaagtattcccctcgtcaagagaatggc
agtgctgccattaaagcaccaagcgaggacatgaatgagttgacatctgaactccaagtt
gaggaaccaattgtagttggaacagaggaaattgcaagagttgcctcattgtggtcaggg
ataccagtccagcagttaactgctgatgatagaaagcttctcgtaggactagatgatgaa
ctcagaaagcgtgtgattggtcaagatgatgctgttatggcaatatctagagcggtgaag
agatcacgtgttggcctcaatgatcctgacagacctattgccactctacttttctgtggt
ccgacaggagttggtaaaactgagcttactaaagctctagcagctagttattttggatcg
gaatctgctatgcttagattagacatgagcgagtatatggagaggcacactgtgagcaag
ctcataggctctcctccagggtacattggatatggtgaaactggtactctgacagaagct
gtcaggagaaagccatttactgtagtattacttgatgagatagagaaagctcaccctgat
attttcaacattcttctccaaatttttgaagatgggcatctgtcggactcacagggccgc
agagtgtccttcaagaacacattgattgtcatgacatcaaatgttggttctacatcaatt
tcaaagggaagacgaagcatgggtttcatgacagaagatactgaatcaagctcatatgtt
gcaatgaaatctctagtaatggaagagttgaaggcatttttccgtccagaattgctcaac
agaatcgatgagatggttgtattccgtcccttagagaaaactcagatgctagcaattctt
gatatcatcctacaagaagtgaagggtaggctgttagcccttggaataggccttgaggtg
tccgatgcaatgaaggacctgatttgcgaagaaggctatgacaagagctacggtgcgcgg
ccactgaggagagccgtcacccacctgattgaggatgtgatcagcgaagcaattctattt
ggcgaatacaagcctggggacacgatactgatggatattgatgccgcggggaaaccttgc
atgagccacctgaatgagaaggttgtccagttgtctgatccgacacggacattctga
DBGET
integrated database retrieval system
