Oryza glaberrima (African rice): 127761912
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Entry
127761912 CDS
T08853
Name
(RefSeq) protein argonaute 1A isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127761912
03036 Chromosome and associated proteins [BR:
ogl03036
]
127761912
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127761912
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127761912
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
127761912
microRNA pathway
RISC loading complex
127761912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
Gly-rich_Ago1
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
127761912
NCBI-ProteinID:
XP_052142204
LinkDB
All DBs
Position
2:complement(26465331..26476896)
Genome browser
AA seq
1082 aa
AA seq
DB search
MAFQLDNGYYSHQALAMMRKKKTEPRNAGESSGTQQATGAPGRGPSQRPERAQQHGGGGW
QPANPQYAQQAGRGGGQHQGRGGRYQGRGGPTSHQPGGGPVEYQAHEYYGRGVQRQGGMP
QHRSGSGGHGVPASPSRTVPELHQASQDQYQATVVAPSPSRTGPSSLPVEASSEEVQHQF
QELAIQGQSPTSQAIQPAPPSSKSVRFPMRPGKGTFGDRCIVKANHFFAELPDKDLHQYD
VSITPEVPSRGVNRAVIGEIVTQYRQSHLGGRLPVYDGRKSLYTAGPLPFTSRTFDVILQ
DEEESLAVGQGAQRRERPFKVVIKFAARADLHHLAMFLAGRQADAPQEALQVLDIVLREL
PTARYSPVARSFYSPNLGRRQQLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLP
VIDFVAQLLNRDISVRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATREL
SFPIDNHGTVKTVVQYFQETYGFNIKHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKR
LNEKQITALLKVTCQRPQERELDILQTVHHNAYHQDPYAQEFGIRIDERLASVEARVLPP
PWLKYHDSGREKDVLPRIGQWNMMNKKMVNGGRVNNWTCINFSRHVQDNAARSFCRELAI
MCQISGMDFSIDPVVPLVTARPEHVERALKARYQEAMNILKPQGGELDLLIAILPDNNGS
LYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALTRRIP
LVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLF
KVWKDPQRGTVSGGMIRELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLFYELDAIRKA
CASLEADYQPPVTFVVVQKRHHTRLFANNHKDQRTVDRSGNILPGTVVDSKICHPTEFDF
YLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHL
AAFRARFYMEPDTSDSGSMASGAHTRGGGPLPGVRSTKPAGNVAVRPLPDLKENVKRVMF
YC
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggccttccagttggacaacgggtactactcccatcaagctttagccatgatgagaaag
aaaaaaactgaaccccgtaatgctggggaaagttctggaactcaacaagccactggagct
cctggacggggtccttcacagcgacctgagagagctcaacagcatggaggtggtggttgg
caacctgccaatcctcaatatgctcaacaagctggtcgtggtggtggacaacaccaggga
cgtggtggacgttaccagggtcgtggagggccaacatcacatcaaccaggtggtggtccg
gttgaatatcaagcacatgagtactatggccgtggtgtccaacggcaaggaggaatgcca
caacacaggagtggcagtggtggacatggagttcctgccagtccatcaagaacagttccc
gagctgcaccaagcctcacaagaccagtaccaagctacggtggttgcaccatcaccatca
agaactggcccatcttcgctgcctgttgaggccagcagcgaagaagtccaacatcagttt
caggaacttgccatccagggtcaaagccccactagccaggccattcaaccagcaccacca
tcgagcaaatcagtgagatttccaatgcgccctggcaagggtacatttggtgataggtgc
atcgtgaaagccaaccatttctttgctgaattgcctgacaaagaccttcaccagtatgat
gtgtctataactcctgaggttccttcacgtggtgtcaatcgtgctgtcattggagaaatt
gtaacacaatataggcagtctcatttgggtggccgtcttccagtctatgatggaaggaag
agcttatacacagctggtccattaccatttacttctaggacctttgacgttattctgcag
gatgaggaagagagccttgctgttgggcaaggtgcacagaggcgtgagagaccatttaag
gtcgtgatcaaatttgctgcacgcgctgatctccaccatttagccatgtttttagctgga
aggcaagcggatgctcctcaagaagctcttcaagttcttgacattgttctacgtgaattg
cctactgcaaggtactctccagttgcaaggtcattttattcgcctaacttaggaaggcgc
caacaacttggcgagggcctggaaagttggcgtggtttttaccaaagcatacgacccacg
cagatgggactttctctgaatattgatatgtcatcgacagcattcattgagcctctacct
gtgattgactttgttgcacagcttttgaacagagacatctcagttagaccattatctgat
gctgatcgtgtgaagatcaagaaggccctaaggggtgtaaaggttgaggtcacacataga
ggcaatatgcgcaggaagtatcgcatttctggccttacctcgcaagcaacacgagagctg
tcttttcccattgataatcatggtactgtgaagacggtggtgcaatacttccaggagaca
tatggatttaacattaagcacacaactttgccttgcttgcaagtgggcaatcaacaaagg
ccaaattatctaccaatggaggtctgtaagattgtggagggacagcgttactcaaaaaga
ctaaatgagaagcagataactgctcttcttaaagtgacctgccagcgccctcaagagcgt
gagctggacattttgcagactgtgcatcacaatgcataccatcaggatccatatgcacag
gagtttggcataaggatcgatgagcgacttgcatctgttgaagctcgtgttctaccaccc
ccctggcttaagtaccacgatagtggcagagagaaggatgtcttgccaagaattggccaa
tggaatatgatgaataagaaaatggtcaatggtggtagagttaacaactggacatgcatc
aatttttctcgtcatgtccaagataatgctgctaggagtttctgtcgcgagcttgctatt
atgtgccaaatatctgggatggacttctcaattgatcctgtggttcctctagtgactgca
agacctgaacatgtggaaagagcgctcaaggcacgctatcaagaggccatgaatatactg
aaaccacagggcggggagcttgacctgctgattgcaatattgcctgacaataatggttct
ctttatggcgatctcaaaaggatatgtgagactgatcttggattggtctcgcaatgctgt
cttacgaagcatgtttttaagatgagcaaacagtatttagcaaacgttgcccttaaaatc
aatgttaaggtgggaggaagaaatacagtacttgttgatgctttgacaaggaggattccc
cttgtgagtgataggccaacgatcatttttggtgctgatgttacacatccccatcctgga
gaagattctagcccttccattgcagctgttgttgcttctcaagactggcctgaggtcacc
aaatatgccggattagtgagtgcacaggcccatcgtcaggaattgatacaggatcttttt
aaagtatggaaagatcctcaaagaggaactgtaagtggtggaatgatcagagagcttctc
atttctttcaagagggcaactggacagaaaccccagaggattatattttacagggatggt
gtcagtgaaggacagttttatcaggttctgttttatgagcttgatgccattagaaaggca
tgtgcatctttggaagccgattatcagccacccgttacctttgtggtggtccagaagcgt
catcacacaaggctgttcgctaataaccacaaggaccagcgcactgttgacagaagtgga
aatatactaccaggcaccgtggttgattcaaagatatgccatcctactgagtttgatttc
tacctgtgtagccatgcgggcattcagggaacaagtcgccctgcacattatcatgttctg
tgggatgagaacaagttcactgctgatggtttgcaaactctgacaaacaacttgtgctac
acctatgcaaggtgcacccgttctgtatcaatcgttcctcctgcatattatgcccatctc
gcggcatttcgagctcgattttacatggagccggatacttcagatagtgggtcgatggcg
agcggtgcccatacccgtggcggtggcccccttcctggtgtacgcagcactaagcctgct
gggaatgttgctgtaaggccgcttcctgatctgaaggaaaatgtcaaacgtgtcatgttc
tactgctaa
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