Oryza glaberrima (African rice): 127761993
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Entry
127761993 CDS
T08853
Name
(RefSeq) WD repeat-containing protein RUP2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04120
Ubiquitin mediated proteolysis
ogl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127761993
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127761993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127761993
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127761993
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127761993
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127761993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
ANAPC4_WD40
Beta-prop_EIPR1
EIF3I
Beta-prop_NOL10_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
127761993
NCBI-ProteinID:
XP_052142288
UniProt:
I1NWJ5
LinkDB
All DBs
Position
2:complement(720970..722843)
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AA seq
400 aa
AA seq
DB search
MSNPSSPATSTAAGEQQLHDQDHRDEAALQQEHAAAGIIPDDEDKLSPPRCEWEFRLAAT
VPSPALAGASDSIGSLDFDPTGRHLATGGIARKIRIYRVAEPSSPAACICVPAKLSSVRW
RPGGGEAVAASHVGCGDYDGVVTEYDVERGVPVWERDEHEGRRVWALDYARGGGAATMVA
SGSDDRTAHVWDPRAPAGAAGSWATARAGGAVLCVEFDPAGGPQLAVGSADRRAAVHDVR
ALGRGPVASMDGHGRAVTYVRWAAAARRVVTSAADGTHRLWALPAAAETAAREVRSYSGH
VSGRSFVGMGVWRGAGLIASGSESGHVFVYDLRWSKPIWVHPFSHADAFVSAVAWRQLVG
DDNDGQLVAGGSDGVLKLFTTHRRLTPDVAGVGDDDVAAC
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacccctcctcgccggccacgtccaccgccgccggggagcagcagctgcacgat
caggatcaccgggacgaggcggcgctgcagcaagaacacgccgccgccggcattattccc
gacgacgaggacaagctgtcgccgccgaggtgcgaatgggagtttcgcctggcggccacc
gtgccgtcgccggcgctcgcgggcgcgtcggactccatcggcagcctcgacttcgacccc
accggccgccacctcgccaccggcggcatcgcccggaagatccggatttacagggtcgcc
gagccgtctagccccgccgcctgcatctgcgtcccggccaagctgagcagcgtgcggtgg
cgccctggcggcggcgaggcggtggcggcgtcgcacgtggggtgcggcgactacgacggc
gtcgtgacggagtacgacgtggagcgcggcgtgccggtgtgggagcgcgacgagcacgag
gggcggcgggtgtgggcgctcgactacgcccgcggcggcggcgcggcgacgatggtggcg
tccgggtcggacgaccggacggcccacgtgtgggacccgcgcgccccggccggcgcggcg
gggtcgtgggcgacggcgcgcgccggcggcgccgtgctgtgcgtggagttcgaccccgcc
ggcgggccgcagctggcggtgggctccgccgaccgccgcgccgcggtgcacgacgtgcgc
gcgctgggccgcggcccggtggcgtccatggacggccacggccgcgccgtgacgtacgtc
cggtgggcggcggcggcgcggcgggtggtgacgtcggcggcggacggcacgcaccgtctg
tgggcgctgccagcggcggcggagacggcggcgagggaggtgcggtcgtacagcggccac
gtcagcgggcgaagcttcgtggggatgggggtgtggcgtggcgcggggctgatcgccagc
ggctccgagtccggccacgtcttcgtttacgacctccgctggtccaagcccatctgggtc
cacccattctcccacgccgacgccttcgtcagcgcggtcgcatggcgccagctcgtcggc
gacgacaacgacggccagctcgtcgccggcggctccgacggcgtcctcaagctcttcacc
acccaccgccgtctcacccccgacgtcgccggcgtcggcgacgacgacgtggctgcatgc
tag
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integrated database retrieval system
