Oryza glaberrima (African rice): 127762064
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Entry
127762064 CDS
T08853
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127762064
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
127762064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
127762064
NCBI-ProteinID:
XP_052142375
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All DBs
Position
2:complement(29491723..29503088)
Genome browser
AA seq
1620 aa
AA seq
DB search
MDGAHGQRQPMSPAISASAVLPQQRQMQLHHHHHHPARSSIADLFTLYLGMNSKQRVEDR
TRETSNKLQKRVTAMNRDLPPRDEQFISDFEQLHMQFPDQEQLQAVTESVLISFVLQCSS
HAPQSEFLLFATRCLCARGHLRWDSLLPSLLNVVSSVEVPMGQGVSVTTGGPATSSSSAI
AVPNAPSFHPSNPTSPLSAMNTIGSPTQSGIDQPIGANVSAIKGAEFSSPGQLGLTARGD
QSRRGAEISYLHHLSCRIILAGLESDLKPATHAVIFQHMVNWLVNWDQRPHGVDQADALQ
LQTLRLERPLHEWMHLCLDVIWILVNEDKCRVPFYELVRSNLQFLENIPDDEALVSIIME
IHRRRDMVCMHMQMLDQHLHCPTFATHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPL
HGEDLANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRQHPQQSSTPGAVF
SPDMIGEAVADRTIELLRLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVT
NSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNISPQ
SILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMTKASGERMIDFTSLDE
RAMGMFWVLSFTMAQPACEAVMNWFTSVGVADLIQGPNLQPNERMTMMRETYPLSMSLLS
GLSINLCLKLAFQLEETIFLGQNVPSIAMVETYVRLLLITPHSLFRPHFTTLTQRSPSIL
SKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKVKRGEHRLFRLAENLCMN
LILSLRDFFLVKKELKGPTEFTETLNRITIISLAITMKTRGIAEVEHIIYLQPLLEQIMA
TSQHTWSEKTLRYFPPLIRDFLMGRMDKRGQAIQAWQQAETTVINQCNQLLSPSAEPTYV
MTYLSHSFPQHRQYLCAGAWMLMNGHLEINSANLARVLREFSPEEVTANIYTMVDVLLHH
IQLELQRGHQIQDLLSKAITNLAFFIWTHELLPLDILLLALIDRDDDPYALRLVINLLER
PELQQRIKAFCTSRSPEHWLKNQPPKRVELQKALGNHLSGKERYPPFFDDIAARLLPVIP
LIIYRLIENDATDIADRVLAVYSTFLAFHPLRFTFVRDILAYFYGHLPSKLIVRILNVLG
VSTKTPFSESFAQYLASSNSSICPPPEYFANLLFGLVNNVIPPLSCKSKSNPSDAAGSTA
RTTYNKPYTSSAGGISNSDGQRAFYQNQDPGSYTQLVLETAAIEILSLCVPASQIVSSLV
QIIAHVQAMLIQSNSGHGMSGGLGQNSGVPTSSGGGVEPVGANRPNTTASGINASNFVSR
SGYSCQQLSVLMIQACGLLLAQLPPEFHTLLYAEAARIIKDCWWLADSSRPVKELDSAVG
YALLDPTWASQDNTSTAIGNVVALLHSFFSNLPHEWLESTHTVIKHLRPVNSVAMLRIAF
RILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPPVEASEIADIIDFLHHAVMY
EGQGGPVQSTSKPKLEILTLCGKVMEILRPDVQHLLSHLKTDPNSSVYAATHPKLVQNPS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggacggggcgcacgggcagaggcagccgatgtctccggcgatctctgcttcggcggtg
ctcccgcagcagcggcagatgcagctccaccaccaccaccaccacccggcgcggtcgtcc
atcgccgatctcttcaccctatacctcggcatgaactcgaagcagcgggtcgaggatcga
actagggagacctcgaacaagttgcagaagagagtaactgctatgaacagagatctgcct
ccccgagatgagcaattcatttcggattttgagcagttgcacatgcagttcccagaccaa
gagcagctgcaggcagttacggaatcagttctcatctcatttgtcctgcagtgtagtagc
cacgccccacaatctgagttcttgctctttgccacacgttgcctgtgtgctcgaggccac
cttcgatgggacagtctccttccttctctacttaatgtagtttcctccgtggaggtacca
atggggcaaggggtttctgtgactactggtggcccggcaacatcttcttcatcagctatt
gcagtgccaaatgccccaagctttcacccttcaaatcccacatctccattgtcagcaatg
aacactataggatctcccactcaatctggtatcgaccaacccataggtgcaaatgtctca
gccattaagggagcagaattctctagccctggacagcttggtctgacagctagaggtgac
cagtctcgcaggggagcagaaattagttatctgcatcacttatcctgtagaattattcta
gcagggctggagtctgatttgaagccagccacccatgctgtgatattccagcatatggta
aattggcttgttaattgggaccagcgaccgcatggtgtggaccaagctgatgcattgcaa
ttgcaaaccttgaggcttgaaagacctttgcatgaatggatgcacctatgcttagatgtg
atatggattctagttaatgaagataaatgtcgtgttccattctacgagcttgttcgcagc
aacttgcagtttctcgaaaatattcctgacgatgaagcactagttagtattattatggag
atccataggaggagggacatggtgtgtatgcacatgcagatgttggatcaacaccttcat
tgcccaacatttgcaactcatcggttcttgtcgcaatcatacccaagcatagctggtgaa
tctgttgctaatttgcgttattctcccattacttatccaagtgtattgggagagccgcta
cacggagaggatcttgcaaactccattcctaaagggggtttagactgggaacgtgctttg
cgttgcttgaggcatgcactccgcacaactccgtcaccagactggtggaggcgtgttctt
cttgttgctccttgttatagacaacatcctcaacaatcatcaacgccaggagctgttttc
tcacctgatatgatcggtgaggcagttgctgacaggacaattgaactactgaggctcacg
aactcagagactcagtgctggcaagattggcttttatttgctgacatttttttctttctg
atgaaaagtggctgtattgattttcttgatttcgtggacaagcttgcatctcgagtaaca
aatagtgatcaacagattcttcgcagtaatcatgtcacttggttactcgcacagattatc
cgcattgagattgtgatgaacacccttagttcggacccaaggaaggttgaaactacaagg
aagataatttcgttccacaaagaagacaagagccttgatccaaataatatcagtcctcaa
agtattcttcttgatttcataagtagcagccaaactttgcggatttggtctttcaacact
tcaattagagagcatttgaacagtgatcagcttcagaaaggcaaacagatagatgagtgg
tggaaacaaatgacaaaagcttctggggagaggatgatagattttacgagcttggatgag
cgggcgatgggcatgttttgggttctctccttcaccatggcacaaccagcatgtgaagca
gtcatgaactggtttacatcagtaggagtagcagatttaattcagggacccaatttgcag
ccaaatgaaagaatgacaatgatgcgtgaaacttatccactgtctatgtcattgctttct
gggttgtctatcaatctatgtttgaaacttgctttccagcttgaagagaccatatttctt
ggccagaatgttcctagcattgctatggtggaaacctatgttagactgctgcttataacc
cctcattcattgttccgcccgcattttacgacattaacacaaagatctccatctatcctg
agcaaatctggtgtgtctctgctcctacttgagatactgaattacaggctacttcctcta
tacaggtatcatgggaaaagcaaggcattgatgtatgatgttacaaagataatatcaatg
attaaagtcaaacgtggagagcatcgtctttttagattagcagaaaatttgtgcatgaat
ttgattctctcactaagagacttctttttggtgaaaaaagaattgaagggtccaactgag
tttactgaaacacttaaccgcataacgataataagccttgctatcaccatgaagacacgt
ggaattgctgaggtcgaacatataatttatcttcaaccattattagagcaaattatggca
acgagccagcatacatggtcagagaagactctaagatattttcctccccttattcgagat
tttttaatggggaggatggataagagaggccaagctatccaagcatggcagcaggctgag
acaactgttattaatcaatgtaatcagctactctcaccatctgctgagccaacctatgtt
atgacatatttaagtcacagtttccctcagcatcgtcaatatctttgtgctggtgcttgg
atgctgatgaacggacatctagagatcaacagtgcaaatcttgcccgtgttttgagagag
ttttcacccgaagaagttacagcaaatatttatacaatggttgatgttcttctgcatcat
atccaacttgagctgcaaagagggcatcaaattcaggacttactctctaaagcaattacg
aatcttgctttctttatctggacacatgagttacttccattggacattcttctgttagct
cttattgatagagatgatgatccttatgctttacgccttgtgataaatctccttgaaaga
ccggaacttcagcaaagaattaaagcattctgcacttcgcgttctccagagcattggcta
aaaaatcagcctccaaaaagagtagaacttcagaaagccctcggtaaccatctctcaggg
aaagaacgttacccccccttttttgatgacattgctgctcgtctgcttccagtcatcccg
ttgataatttataggcttattgagaacgatgccacagatatcgcagatagagtccttgca
gtttattctacctttctggccttccatcctctaaggtttacatttgtgcgtgatattctt
gcatatttctatggtcatcttccatccaagttaattgttaggatcctcaacgtgctgggt
gttagcactaagacacctttctcagaatcatttgcccagtatctagcgtcatcaaattca
tctatttgtccaccaccggaatacttcgccaaccttttgtttggccttgttaataatgtc
atacctcctttgagttgcaagtccaaatcaaacccatcggatgctgctggcagtacagca
cgcacaacttataacaagccttatacatcttccgctggaggaatcagtaactctgatggt
cagagggcattttatcaaaatcaggatcctggatcatatacacagcttgttttggaaaca
gcagccattgaaattctctcactttgtgtgccagcttctcaaatagtatcctctctagtt
caaataatagcacatgtacaagcaatgctcatacagtcaaatagtggtcatggaatgtca
ggtggtttgggccaaaactctggggtgccgacttcttcaggtgggggagttgaacctgtt
ggtgccaaccgaccaaacaccacagcaagtggaatcaatgcatctaactttgtttctaga
agtggctattcctgccaacaattgtctgttctgatgattcaagcttgtggtctgttgctg
gcacaactcccaccagaattccacacacttctatatgcagaagcagcccggatcataaaa
gattgttggtggcttgctgatagttcaaggcctgttaaagagcttgattctgctgttggg
tatgcactgttggatcctacttgggcttctcaagacaatacatctacagccataggtaac
gtcgttgcccttcttcactcgtttttcagcaatcttccacatgaatggcttgaatctacc
cataccgtcatcaagcatcttcggccagtcaactcagttgccatgttaagaattgctttc
cgcatattgggtcccttgttgcctcgtctagcctttgctcgacctctgttcatgaagacc
ttggctttgctgttcaatgtgttgggggatgtatttgggaagaattctcaggcttcacct
cctgtggaggcatcggaaattgctgacataattgacttcttgcaccatgcagtcatgtat
gagggtcaaggaggtcccgttcagagcactagcaagcccaaactagagatattgacgtta
tgtgggaaagtaatggaaattctgaggccagatgtgcaacatcttctatcccacctgaag
actgatccaaactcttcagtttacgcagctactcaccccaagctagttcaaaacccatct
tag
DBGET
integrated database retrieval system
