Oryza glaberrima (African rice): 127762198
Help
Entry
127762198 CDS
T08853
Name
(RefSeq) ribonuclease TUDOR 1-like
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
ogl
Oryza glaberrima (African rice)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
SDH_C
Motif
Other DBs
NCBI-GeneID:
127762198
NCBI-ProteinID:
XP_052142566
UniProt:
I1P0U5
LinkDB
All DBs
Position
2:complement(18835749..18842351)
Genome browser
AA seq
986 aa
AA seq
DB search
MASATGASGWLRGKVKGVTSGDCLLIMGSTKADVPPPEKSITLSYLMAPRLARRGGVDEP
FAWESREFLRKLCIGKEVTFRVDYTAPNVGREFGTVYLGDKNVAYSIIAAGWARVKEQGP
KGGEPSPYLTELLRLEEVAKQQGLGRWSKEPGAAEESIRDLPPSAIGEASGFDAKGFAVA
NKGKSLEAIVEQVRDGSTVRVYLLPSFQFVQIYVAGVQSPSMGRRPPNPTVVAAAESTAD
GATNGGDSEEAPAPLTTAQRLAAAAVSTEIPPDRFGIEAKHFTETRVLNRDVRIVVEGTD
SFSNIIGSVYYSDGDTLKDLALELVENGLAKYVEWSANMMDVDAKIKLKNAELQAKKDQL
RIWTGFKPPVTNSKPIHDQKFTGKVVEVVSGDCIIVADDAAPYGSPSAERRVNLSSIRAP
KMGNPRRDEKPDNFAREAKEFLRTRLIGKQVTVEMEYSRRISTVDGQPTTNTADARVLDY
GSVFLGSPSQADGDDVSSIPSSGNQPGINIAETLLSRGFARTSKHRDYEERSHYFDLLLA
AESRAEKAKKGVHSAKESPVMHITDLTTVSAKKARDFLPFLQRNRRHSAIVEYVFSGHRF
KLTIPKETCSIAFSFSGVRCPGKDEPYSNEAIALMRRRILQRDVEIEVEAVDRTGTFLGS
LWESKTNMASVLLEAGLAKLSSFGLDRIPDANVLMRAEQSAKQQKLKIWENYVEGEEVSN
GSASESKQKEILKVVVTEVLGGGKFYVQTVGDQRVASIQQQLASLKLKDAPVIGAFNPVK
GEIVLAQFSADNSWNRAMIVNGPRGAVSSQDDKFEVFYIDYGNQEVVPYSRIRPADPSIS
SSPALAQLCSLAFIKVPNLEDDFGHEAAVYLNDCLLNSQKQYRAMIEERDTSGGKSKGQG
TGTILIVTLVDAETETSINATMLEEGLARLERSKRWDTRERKAALQNLEQFQEKAKKERL
QIWQYGDVESDEEEQAPAARRTGGRR
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagccactggagcgtctggatggctgaggggtaaggtgaagggtgtgacttct
ggggactgtcttctcatcatggggagcaccaaggcggatgtcccgccgcctgagaagtcg
attactctgtcatacctcatggccccaaggctggctcgccgtggtggagtggatgaacca
tttgcttgggaaagcagggagtttctaaggaaactctgcataggaaaggaggtcacattc
agagtggactacacagctccaaatgttggacgagaatttggtactgtttacctcggtgac
aagaatgttgcctactcgataattgctgcaggatgggcaagggtaaaggagcaaggccca
aagggcggtgaaccgagtccatatcttactgagctgctaaggttggaggaagttgctaag
cagcagggtttaggtcgttggagcaaggaacctggtgctgctgaagaatcaataagagat
cttccaccatcagcaattggtgaagctagtggttttgatgcaaagggttttgcagttgcg
aataaaggcaagagtctggaagccattgttgaacaagttcgtgatggcagtacagttcgt
gtttacttgctcccaagtttccaatttgttcagatatatgttgctggagttcagtctcca
tccatggggaggcgcccaccgaatcctacagtggtggctgcagcagagagtactgctgat
ggcgctacaaacggtggagattctgaggaagctccagcaccactgactacagcccaaagg
cttgccgcagcagcggtttctactgaaattccaccggacaggtttggaatagaagctaag
cacttcacagagacacgggttctcaatagagatgtgcgaattgtggtggaaggcacagat
agtttcagcaatataattggctcagtgtattactctgatggggatacattgaaggatctg
gcccttgagcttgttgaaaatggtcttgccaagtatgttgagtggagtgccaacatgatg
gacgttgatgcaaaaataaagctgaagaatgctgagcttcaggctaagaaggaccagttg
agaatttggacaggatttaagccaccagtgacaaactcgaagccaatccacgaccagaaa
ttcactggaaaagttgtagaggttgtgagtggggattgcatcattgttgctgatgacgca
gctccttacggaagtccttctgcagaacgccgggttaatctttcaagcattagagctcct
aaaatgggcaaccctcgtagagatgagaagcctgataattttgctcgtgaagccaaggaa
ttcttgcgcacaaggttgattggcaagcaagtgactgttgagatggaatactctagaagg
atcagcactgtggatggacagcccacaacaaacacagctgatgccagggttttggattat
gggtcggtttttcttggttcaccttcgcaggctgatggtgatgatgtttcttccattcca
agctcaggcaaccaacctggtatcaatattgctgagactctgctctcaaggggctttgct
agaacatctaaacatcgggactacgaagaaaggtcacactattttgacctgctgttggcg
gctgaatcacgagctgagaaagcaaagaaaggagttcattctgcaaaagaatcacctgtc
atgcacataacagacttgacaacggtttcagcaaagaaggccagagacttccttcctttc
ttacagcggaacagaagacattccgcaattgttgaatatgtcttcagtggccaccgtttc
aaactaacaattcctaaggagacttgcagcattgccttctctttctctggtgttagatgc
cctggtaaagatgagccctactcgaacgaagctattgctttgatgaggaggagaattcta
cagcgagatgtggagatagaggttgaagcagttgatagaactgggacattcttaggttcc
ttatgggagtccaaaaccaacatggcttctgttcttctggaggctggtctggccaagctt
agttcatttggcttggataggattccggatgcaaatgttctaatgagggctgaacagtct
gcaaagcagcagaaactcaagatctgggagaattatgtagagggtgaagaagtttccaat
ggatctgcatctgaatccaaacaaaaggaaattctcaaggttgttgtaactgaagtcctt
ggtggtggaaagttctatgtccaaacagttggtgaccaaagagtggcttccattcaacaa
cagcttgcatctttaaaacttaaagatgcacctgttattggtgcttttaatcctgtgaag
ggggaaatagttcttgctcagtttagtgctgacaactcctggaatagagcaatgattgtg
aatggacctcgaggagctgtatcatctcaagacgacaagtttgaagtattctacattgac
tatggcaaccaagaagtcgttccttacagtcgcatacggcctgctgacccatcaatttcc
tcttcgcctgctcttgctcagttgtgcagccttgccttcataaaagtgcccaacctagaa
gatgattttggccatgaagcagcagtctatctgaatgattgcttgctcaacagccaaaaa
caatacagggcaatgattgaagagcgtgatacttctggtggaaagtccaagggacaaggc
actggaactattctgattgttacactggttgacgcagagacagaaaccagcatcaatgct
accatgcttgaggaagggcttgctcggcttgaaagaagcaagagatgggatactagggag
agaaaggctgctctccagaatctggaacagttccaggagaaagcaaagaaggaaaggctg
cagatctggcagtatggtgatgttgaatctgacgaggaagagcaagctccagctgctagg
agaactggagggcgtcggtag
DBGET
integrated database retrieval system