KEGG   Oryza glaberrima (African rice): 127762236
Entry
127762236         CDS       T08853                                 
Name
(RefSeq) protein RRC1-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127762236
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ogl03041]
    127762236
Spliceosome [BR:ogl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    127762236
 Complex B
    127762236
SSDB
Motif
Pfam: Surp cwf21 RRM_1 CID CTK3 RRM_7 SAP
Other DBs
NCBI-GeneID: 127762236
NCBI-ProteinID: XP_052142627
LinkDB
Position
2:4153521..4162695
AA seq 954 aa
MSSKKVPFHRHKENEEARKKREQDEAARVYEEFVESFKGDSTSGSKFVRGGVIDPNAKLR
IDSEGGKSKDGGSVPKKGSRYVPSFLPPSFGKEPDKKKEEERPKEKERRKPRVIDEFMEE
LKFEKELRQKRNQEREQWREGRHTDTSASSSRFDELPDELDPIGKLPGSFDDGDPQTTNL
YVGNLSPKVDENFLMRTFGRFGPIASVKIMWPRTEEERRRQRNCGFVAFMNRADGQAAKD
EMEGVVVYDYELKLGWGKSVALPSQALPAPPPGHMAIRNKEGGTVILSGPGGPPLASVKP
QTSELVLTPNVPDIVVAPPDDAHVRHVIDTMALHVLDGGCAFEQAVMERGRGNSLFSFLF
DLKSKEHTYYVWRLYSFAQGDTLQRWRTEPFIMITGSGRWVPPALPSSRSPEREKESTFA
AGRSRRVEVERTLTDSQRDEFEDMLRALTLERSQIKEAMGFALDNADAAGEIVEVLTESL
TLKETPIPTKVARLMLVSDILHNSSAPVKNASAFRTKFEAALPDVIESFNDLYRSITGRI
TAEALKERVLKVLQVWADWFLFSDAYLNGLRATFLRSSHSGVIPFHSLCGDTPEIEKKAS
SEDGSDGFRLNEDGALATGKAAATRELLGLPLAELERRCRHNGLSLCGGKEMMVARLLSL
EEAEKERVYEKDAGIKYGQGESHRTGRDDIAVNARNASRPGEGTDSGESDMLGLSHYAME
AGHKRSNESTPAEPVPSKKPKVDPVLPASKWSREDDVSDDEDRKGGRGLGLSYSSGSDIA
GDSGKADATEVSTDHSNHHQDTILDEEHRKKLRQIEIAVMQYRESLEEKGLRNTEEIEKK
VASHRRRLQSEYGLSFSNDGANNRRSSERTSSERRDRHDDSSRKRRRSLSRSRSPPRRSL
ERDREHNRNRDTDRSHGNDAGRERDRVREKSASRGRDDHYDRSRDREKDRRKGR
NT seq 2865 nt   +upstreamnt  +downstreamnt
atgagttcgaagaaggttccattccaccgacataaggagaacgaagaggcgaggaagaag
agagagcaagatgaagcggcacgtgtttacgaggaatttgtggagtcattcaagggtgat
agcacatctgggtcgaagtttgtccgaggaggtgtgattgatcccaatgccaagctgagg
attgattccgaaggtggaaagtccaaagatggggggtctgttccaaagaagggcagtagg
tatgttccatcttttttgccgccgtcatttgggaaagagccggacaaaaagaaagaagag
gagcgtccaaaggaaaaggaaagacgaaagccacgggtaatagacgagttcatggaggag
ctcaagtttgagaaagagcttcgacaaaagcgtaatcaggaacgtgagcaatggcgtgag
ggtcgacacactgacacatctgcttcctctagccgttttgatgaactaccagatgaatta
gatcccattgggaaacttccaggatcatttgatgatggggatccacaaaccacgaactta
tatgttgggaatctttctcctaaggtggacgagaattttcttatgaggacatttggtcgt
tttggacctattgctagtgtcaagattatgtggcctcgaacagaagaggaacgcagaagg
caaagaaattgtggttttgttgccttcatgaatagggctgatggacaagcagccaaggat
gaaatggaaggtgttgttgtgtacgactatgaactgaaactagggtggggcaaatctgtt
gctcttccttcacaagcactgcctgctcctccaccagggcacatggcaatccggaataag
gagggtggtactgtcatcttatctggtcctggtggtccacctcttgcatctgttaaacca
cagacctcagagctggtcctcacaccaaatgttcccgatatagtggttgctccgccagat
gatgcacatgttcggcatgtgattgacacaatggctctgcatgtactcgacgggggatgt
gcttttgaacaagctgttatggagagaggccgaggaaattctttatttagtttcttgttt
gatcttaaatcaaaggagcacacatactatgtttggaggctatactcatttgctcagggt
gatactttgcagcggtggagaacagaaccatttatcatgatcacaggaagtggaagatgg
gttccacctgctttgccatccagcagaagtcctgagcgtgaaaaagaatctacttttgcg
gctggtagaagcaggcgtgtcgaagtggagcgcacattgactgattcacagcgtgatgaa
tttgaggacatgctacgtgcattgacattggagagaagtcagataaaggaggctatggga
tttgcattggataatgctgatgcagctggagagattgttgaagttcttacagaatctttg
acactcaaggagacacccatcccaaccaaggttgctcggcttatgctagtgtctgatatt
cttcataacagcagcgctccagtgaagaatgcttctgcattccggacaaagtttgaggct
gctctacctgatgttatagaaagcttcaatgatttataccgcagtatcactggaaggatt
actgctgaagctctgaaggagagagttttgaaagttctacaagtatgggcggactggttc
ttattttccgatgcatatctgaatggactaagagctacctttcttagatcaagccactca
ggggtcatcccttttcactctctatgtggtgatacaccagaaattgaaaagaaagctagc
tctgaggacggcagtgatggatttaggctcaacgaagatggtgccttggccacaggaaag
gcagcggcaacaagggagctgttagggcttccgctagctgaacttgaacgccgttgcaga
cataatggcctctcgctatgtggtggtaaagagatgatggttgccaggttgcttagcttg
gaagaggctgagaaggaacgagtatatgagaaggacgcgggcattaaatatggacaagga
gaatcgcatagaactggaagagatgacattgctgtgaatgctcgtaatgcttctagacct
ggagaaggtactgatagtggtgaatcagacatgttgggtctctctcattatgctatggaa
gcagggcacaaacgctctaatgaatccacacccgctgaacctgttccaagcaagaagcca
aaagttgaccctgttttgcccgcttcaaaatggagtcgagaggatgatgtcagcgatgat
gaagatagaaaaggtggcagaggcttaggattaagctattcatctggtagcgatattgct
ggtgattctgggaaagctgatgcaacagaagttagtactgatcactcgaatcatcaccag
gatacgattcttgatgaagagcatagaaagaagttaaggcagattgaaattgctgttatg
cagtatcgtgaatctcttgaggagaagggtttgcgaaacacagaagagattgagaagaag
gttgccagccaccgtaggcgtcttcagtctgaatatggtttatcattttcaaatgatggt
gcaaacaacaggcgctcttctgagaggacatcgtcggagcggagagataggcatgatgat
tcttcaagaaagcgtcgtcgaagcctgagcaggagccgtagtcctccaaggagatcactg
gaaagagatcgagagcacaatcgcaacagagacacagacagatctcatggtaatgatgct
ggaagagagagagacagggtacgtgaaaaaagcgcaagccgagggagggatgatcactat
gatagaagcagagacagggagaaggacaggagaaagggaaggtga

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