Oryza glaberrima (African rice): 127762311
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Entry
127762311 CDS
T08853
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04145
Phagosome
ogl04517
IgSF CAM signaling
ogl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127762311
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127762311
09142 Cell motility
04814 Motor proteins
127762311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogl03036
]
127762311
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogl04812
]
127762311
04147 Exosome [BR:
ogl04147
]
127762311
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
127762311
Cytoskeleton proteins [BR:
ogl04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
127762311
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127762311
Exosomal proteins of colorectal cancer cells
127762311
Exosomal proteins of bladder cancer cells
127762311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
127762311
NCBI-ProteinID:
XP_052142744
UniProt:
I1NXL5
LinkDB
All DBs
Position
2:3435477..3438386
Genome browser
AA seq
447 aa
AA seq
DB search
MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV
PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA
EYQQYQDATADDEEEDYGDEEEDEVAA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatcctgcacatccagggggggcaatgcgggaaccagatcggggccaagttc
tgggaggtgatctgcgacgagcacgggatcgaccacaccggcaagtactcgggcgactcc
gacctccagctcgagcggatcaacgtctactacaacgaggccagcggcggcaggttcgtt
ccgcgcgccgtgctcatggacctcgagccgggcaccatggactcggtgcgctccggcccc
ttcggccagatcttccgccccgacaacttcgtcttcggccagtccggcgccggcaacaac
tgggccaaggggcactacaccgagggcgccgagctcatcgactccgtcctcgacgtcgtc
cgcaaggaggccgagaactgcgactgcctccaaggatttcaagtctgccactctctagga
ggaggaactggttctggtatgggtaccctgctcatctcaaagatcagggaggagtacccg
gacaggatgatgttgacattctcagttttcccctcaccaaaggtttctgataccgtggtg
gaaccttacaatgccacactatctgtccatcagcttgttgagaatgccgatgagtgcatg
gtacttgacaatgaagctctatatgacatctgcttccgcactctgaagctcgccacaccc
acttttggtgatctgaaccatcttatttctgcaaccatgagtggtgttacatgctgcctg
cgcttcccgggacagctgaactctgacctccgcaagctggcggttaacttgatccccttc
cctcgtctccatttcttcatggttggctttgcaccgctgacctcgaggggatcccagcag
taccgcgccctcacagtcccggagctgacccagcagatgtgggacgccaagaacatgatg
tgcgccgccgaccccaggcacggacgctacctcacggcgtcagccatgttccgcgggaag
atgagcaccaaggaggtggacgagcagatgctcaacgtccagaacaagaactcgtcctac
ttcgtggagtggatcccgaacaacgtgaagtcgagcgtgtgcgacatccctcccaacggc
ctgaagatggcgtccaccttcatcggcaactcgacgtcgatccaggagatgttccgccgc
gtgagcgagcagttcacggccatgttcaggaggaaggccttcttgcactggtacaccggg
gaggggatggacgagatggagttcaccgaggccgagagcaacatgaacgacctggtggcc
gagtaccagcagtaccaggacgcgacagccgacgacgaggaagaggactacggcgacgag
gaggaagacgaggttgctgcctaa
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