KEGG   Oryza glaberrima (African rice): 127762326
Entry
127762326         CDS       T08853                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3B
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127762326
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ogl03021]
    127762326
   03036 Chromosome and associated proteins [BR:ogl03036]
    127762326
Transcription machinery [BR:ogl03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     127762326
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    127762326
   PBAF complex
    127762326
   GBAF(ncBAF) complex
    127762326
SSDB
Motif
Pfam: SWIRM Myb_DNA-binding Myb_DNA-bind_6 SWIRM-assoc_1 Myb_DNA-bind_7 FtsK_SpoIIIE_N
Other DBs
NCBI-GeneID: 127762326
NCBI-ProteinID: XP_052142764
UniProt: I1NY61
LinkDB
Position
2:4984559..4988502
AA seq 507 aa
MATPSMPAPAAEAAAAATTATANYMPPAPPQPPSSGAPFSQPPSTAGTVKTEAPPPPSTS
ASSAASAAAPAPAAAAAEESPCTITIPSYSAWFSYDSIHETERRLMPEFFEGEAAAASGS
RGPEAYKYYRDTLVRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEWGLINYGASP
SGAKQGRDKKEEAALSQSSLPIGATMPSKLCTGCRTVCGLAYFSCEKADISLCARCYVRA
NYRPGLTSADFKRIEITEDAKSDWTDKETLHLLEAVLHYGEDWKKVSHHVGSRSEKDCIA
RFTRLPFGEQFMGPKEDKIQFGNDCDLNEESGSHISKRLRLTPLADASNPIMAQVAFLSA
IVGSDVAVAAGRAAISAQSQVDISASETDSSINISKEEESSCTNGLSANDLLKEASANAQ
VQLEKERKAIEQSLSDIVGVQMKEIQDKIRRFEQKELLMEKERKQLHCLKELLFSDQLAV
VQHQRRPPAVTTESKDDEKPKPVISIS
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggccacgccgtcgatgccagcgccggcggccgaggcggcggcggcggcgaccacggcg
acggcgaactacatgcctcccgctccgccgcagccgccgtcctcgggggcgccgttctcc
cagcccccctcgacggcaggcaccgtcaagacggaggcccctccgccgccatccacctcg
gcttcctcagccgcctccgccgccgcccccgcccctgccgccgccgcggccgaggagtcg
ccctgcaccatcaccatcccgagctattcagcgtggttctcctacgactccatccacgag
accgagcgccgcctcatgccggagttcttcgaaggggaggcggcggcggcgtccgggtcc
aggggcccggaggcttacaagtactaccgtgacaccctcgtgaggaggttccgggcgcgg
ccggggcgtaggctgacgctcaccgaggccaggcgtgggctcgtcggagatgtcggctcc
gtgcgtcgcgtgttcgacttccttgaggaatggggtctgataaactatggagcttcgccg
tcgggagcgaagcaggggagagataagaaagaggaggcagcgttatcgcagtcctctttg
ccgattggggcaacaatgcccagtaagctttgcaccgggtgccgcaccgtgtgtgggctt
gcttatttctcttgtgagaaggcagatataagcctctgcgctagatgctatgtccgtgcc
aattaccggccaggtcttacttcggcagacttcaagcgaattgaaattactgaggacgca
aaatcagattggacagataaagaaactcttcaccttcttgaggccgtcctgcattatggg
gaagactggaaaaaggtttctcatcatgttggtagtcgatcagaaaaggactgcattgct
agattcacccgattaccttttggggaacagttcatgggacccaaggaggacaaaattcag
tttgggaatgattgtgatctcaatgaagaatctggatcacatatctcaaaacgactacgc
ctcacgccactggctgatgctagcaatccaatcatggcccaggttgcgttcttgtcagcc
attgttggttcagatgttgctgtagctgcagggcgagcagctatttctgcacagtcccag
gttgatataagtgccagcgagactgattcttctatcaacatcagcaaggaagaagaatct
tcttgcacaaatggtctttcagccaatgatttgctcaaagaggcgtctgccaacgcacaa
gtacaacttgaaaaggaacggaaggctatagagcagtctttatctgacatagtgggtgtt
cagatgaaggaaatccaggataaaatacgtcgtttcgagcagaaggagctgctgatggag
aaggagaggaagcaactccactgcttgaaggaattgctcttttctgatcagctagctgtt
gtgcagcaccaacgcaggcccccggctgtcaccacagagagcaaggacgatgagaaaccg
aagcccgttatcagcataagttga

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