Oryza glaberrima (African rice): 127762341
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Entry
127762341 CDS
T08853
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127762341
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ogl04040
]
127762341
Ion channels [BR:
ogl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127762341
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
127762341
NCBI-ProteinID:
XP_052142780
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Position
2:complement(8684200..8693002)
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AA seq
700 aa
AA seq
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MAFREDKYVRFHDWRSEHSVGSEKTVLEGRHNVFDSLMDRTVGAFSFLGNSSHPETLNKP
ASEEKKSKTRVLDPQGPFLQRWNKIFVISCLIAVSVDPLFFYIPVIDGDNICLYLDKKLE
IIASVLRFFTDIFYLLHIIFQFRTGFIAPSSRVFGRGVLVEDTFAIAKRYLSTYFLIDFL
AVLPLPQVLVLVVLPRLQGSSVMTAKNILMVIVICQYVPRLIRIIPLYLQITRSAGIITE
TAWAGAAFNLLIYMLASHVLGALWYLLSIQREDTCWKDACSRHDGCDSGSLFCGSNAARN
NSFLQDFCPTNGTDNADPTFGIYLPALQNVSQSTSFFEKLFYCFWWGLQNLSSLGQNLKT
STYTWENLFAVFVSTSGLVLFALLIGNVQTYLQSASVRIEEMRVKRRDTEQWMAHRLLPD
NLKERILRHEQYRWQETRGVDEEGLLSNLPKNLRREIKRHLCLSLLMRVPMFENMDEKLL
DAMCDRLKPMLYTEGSCIIREGDPVNEMLFIMRGNLESMTTNGGQTGFFNSNIIKGGDFC
GEELLTWALDPTSASNLPSSTRTVKTLSEVEAFALRADDLKFVATQFRRLHSKQLQHTFR
FYSQQWRTWAACFIQAAWHRYCRKKLEDTLFEKEKRLQAAIVSDGSSSLSLGAALYASRF
AGNMMRILRRNATRKARLQERVPARLLQKPAEPNFFAEDQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggctttccgagaggacaaatatgtgagatttcatgactggagatcagaacattctgtt
ggttccgaaaagacagttttagaaggaaggcataatgtgtttgactcgctaatggataga
actgtaggagccttttcattcctagggaattcctcacatcctgaaaccctcaacaaacca
gcttctgaggaaaagaagtccaaaacaagagttcttgatcctcaagggccattcttgcag
agatggaacaagatatttgttatatcatgccttattgcagtttctgtggacccgttattc
ttctatattccagtgattgatggtgacaatatctgcttatatctggacaaaaagttggaa
atcatagcaagtgtcctgcgattttttacagatatattctatttactccatataattttt
cagttcaggacaggctttattgctccttcctctagagtgtttggtcgaggtgtcttggtt
gaggacacctttgcaatagcaaagcggtatctatcaacatattttctgattgatttctta
gctgttctgccccttcctcaggtgctcgtattggtagttctaccccgtctgcaaggctcc
tcagttatgacggcaaaaaatatattaatggttatagttatttgtcaatatgtacctcgg
ttgattcgaataataccattgtaccttcaaatcaccagatcggctggtataattacagag
acagcatgggctggtgctgcatttaaccttttaatttatatgcttgctagtcatgtcctt
ggagctctttggtaccttctttccattcaacgagaagacacctgttggaaagatgcatgt
agtagacatgatggctgtgattcgggatctttattttgtgggagtaatgcagctagaaat
aacagtttcttacaagatttttgcccgacaaatggaactgacaatgcagatccaactttc
ggaatttatcttccagctcttcaaaatgtttcacaatcaacgagtttctttgaaaaattg
ttttattgcttttggtggggtctgcaaaatctaagttctcttggtcaaaatcttaagaca
agcacgtatacatgggagaatctatttgctgtttttgtctcgacatcaggtctagttttg
tttgcactccttatcggtaatgtgcagacctatctacaatctgcctctgtgcgtatagaa
gaaatgagagtgaaacggcgtgacacagagcaatggatggcacatcgattacttcctgat
aacctcaaggagcgaatactgcgtcatgaacaatataggtggcaagaaacaagaggggtt
gatgaagagggccttctttcaaatcttcctaagaatcttaggagagagataaagaggcat
ctttgcctgtcgcttctcatgagggttccaatgtttgaaaacatggatgagaagctcttg
gatgccatgtgtgatcgtctaaagcccatgctgtacacagaaggcagctgcatcattcgc
gaaggagacccagtgaatgaaatgctcttcatcatgagaggaaatcttgagagtatgacg
acaaatggtggacagactggctttttcaactccaatattatcaaaggtggagatttttgt
ggtgaagagcttctcacatgggcacttgaccctacttcagcttcaaaccttcccagctca
accaggactgtgaaaacgctgtctgaagtcgaagcttttgctttgagggctgatgacttg
aagtttgtagccacccaattcaggagactccacagcaaacaactccagcatacatttaga
ttctattcacagcaatggagaacctgggcagcttgttttatacaggcagcttggcataga
tactgcagaaagaaactggaggatactttgtttgagaaggagaagaggttgcaagcggca
attgtcagtgatggttcgagttcgctcagtcttggtgcggcgctatatgcttcacgtttt
gctggtaatatgatgcggatcttacggagaaatgccactcgaaaggcccgtttgcaggaa
agagtgcctgcaaggttattacagaagcctgcagaaccgaactttttcgctgaagatcag
taa
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