Oryza glaberrima (African rice): 127762373
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Entry
127762373 CDS
T08853
Name
(RefSeq) DNA repair and recombination protein RAD54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127762373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127762373
DNA repair and recombination proteins [BR:
ogl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
127762373
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SLFN-g3_helicase
SWI2_SNF2
Topo_CTD_bact
Motif
Other DBs
NCBI-GeneID:
127762373
NCBI-ProteinID:
XP_052142825
LinkDB
All DBs
Position
2:complement(30928981..30944273)
Genome browser
AA seq
976 aa
AA seq
DB search
MPSTSKCNRISRVADEEEEEEIVAVSSDADESESESEVGSGAEEEDDDYVGESSDAASGS
GDGDGDEEGGRGDIGDGEGEGGGRRVRSACRGVRANDRERKSQNVDALVRGNLVVRRQPL
IPRILSVSDAAAIARKPFKPPCQNGYSENNEQLARRLSARKRFVPWGSVQPFAVTNILPQ
SPAVSSDDSVEKEESLPPGIEPLILWQPEGCDKENSNFSAIKVDHLLVRYLRPHQREGVQ
FMFDCVSGLLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTS
LVSNWESEIIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQVLIVSYETFRMHSSK
FERPGSCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTN
PGVLGDATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNH
LPPKIVEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLI
YDTIKSNNSGGSGFDDCLRFFPPELFSGRSGSWTGGGGMWVELSGKMHVLARLLGHLRLK
TDDRIVLVSNYTQTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLL
SSKAGGCGLNLVGGNRLILFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKV
YQRQMSKEGLQKVIQQEQADGKMQGSSLSTEDLRDLFTFHEQVRSEIHENLKCNRCNKDG
CMVLDGSKFDSAATEHEASNSGENSYIDIGGFGAISGCVQKMNSSNQQIGSPSEEDLGSW
GHHSDPSTVPDTILQCSSGDEVSFVFTNQIDGKLVPVESMARAATHRTHEVTVNAEKEVG
KINSSNVPGTERQSLLGKNLKMMGFNLKNSSMKFPTKSRRMLPNCLQGMNKTSTSSDHQQ
TKKLHVISDASDDDFV
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgacgagcaaatgcaaccgcatcagccgcgtcgccgatgaggaggaggaggag
gagatcgttgccgtctcctccgacgccgacgaatcggagtcagagtcggaggtggggagt
ggagcggaggaggaggatgacgactacgtgggggagagtagtgacgcggccagcggcagc
ggcgacggcgacggcgacgaggaaggaggtaggggcgacattggcgatggcgagggcgag
ggcggcgggcggcgagttcggagcgcgtgtcgcggcgtgagagcgaacgaccgggagagg
aaatcgcagaatgtggatgccctcgtcaggggaaatctagttgtaagaaggcagccactt
attccacgtattctttcggtttctgatgcggcagcaatagctcgaaagccattcaaacct
ccctgtcaaaatggatacagtgaaaataatgagcaacttgctcggcgcctttcagctcgt
aaaagatttgtcccatggggttcggtgcagccatttgcagttacaaatattcttccacaa
tcacctgctgtttctagtgatgattccgtagaaaaggaggaatcccttccaccaggcata
gagccattgattttgtggcaacccgaggggtgtgacaaggaaaacagcaatttttctgca
atcaaggttgatcacttgcttgtacgttacctccgaccccatcaaagggaaggagttcag
tttatgtttgattgtgtatctgggttgttaaatgatgatggaatatctggttgcatttta
gctgatgacatgggattggggaagactttacagtcgataactttactatacacccttctt
tgccaaggatttgatgctaagccaatggttaaaagggctgtcgtcgtaacccccacaagt
ttagttagcaactgggaatctgagataattaaatggttaaaaggcagagtgcagttgctt
gctctttgtgaaagcacacgcgctgatgttctttctggaattgaaagtttcttaaaacct
ttgagccgtcttcaggtactcatcgtatcttatgagacattccgcatgcattcttcaaaa
tttgaaaggccgggaagctgtgacctcctcatatgtgacgaggcccacaggctgaaaaat
gatcagaccctaaccaataaagccttggctgcccttccttgtaaacggcgtatcctgtta
tcaggcaccccaatgcagaatgatctggaggagttcttttcaatggtaaatttcacaaac
ccaggagttctgggggatgctacatatttccgcagatattatgaagcaccaatcatttgc
ggaagagagcccacagcaagtgcagaagaaaagaacttgggatctgagagatctgcagag
ctcagtgcaaaagtaaatctgtttatattgagacggacgaatgccctgttatccaatcac
ttgccaccaaagatcgttgaagtagtgtgctgcaagttgactgctttgcaaactgcgctg
tacaaccacttcatacattcaaaaaatgttaaacgcttgatatctgaaggaacaaagcaa
tccaaagttttggcttatattactgctcttaagaagctatgcaaccatccaaagctgatc
tatgacaccataaaaagtaataattcagggggctctggttttgacgactgcctgcgcttt
tttcctcctgaactgttttcgggaagatctggatcatggaccggtggaggaggaatgtgg
gtagaactgtctggcaaaatgcatgtcttagctagattactggggcacctccgtctgaaa
actgatgatcgtattgttcttgtatcaaattatacccagacattggatctgtttgcacaa
ttatgtcgggaaaggagatacccgtatattaggcttgatggagcaacatccattaataaa
aggcaaaagttggtgaaccaattcaatgatccatccagagatgagtttgtctttctactt
agtagcaaggcaggtggctgtgggcttaatttggtaggtggaaatcgattgattctcttt
gatcccgattggaaccctgccaatgataagcaggctgctgctagagtatggagagatgga
caaaaaaagagagtgtacatatacaggttcttaagcacaggaaccattgaggagaaggta
tatcagcgtcagatgtcgaaagaaggtctccaaaaagttattcagcaggaacaagcagat
ggcaaaatgcaggggagttctctttcaacagaagatctgcgtgatctttttaccttccat
gaacaagtcaggtctgaaatacatgaaaatttgaagtgcaatcgctgtaacaaggatgga
tgtatggttctcgatggtagcaaatttgattcagcagccactgagcatgaggcttctaac
tcaggagagaacagttacattgatattggtggatttggagcgatctctggatgtgtgcag
aaaatgaatagttcgaatcaacagattggaagtccttctgaagaagatttaggaagttgg
ggccatcattctgatccatcaactgtacctgatactatactccagtgttcttctggtgat
gaggtttcttttgttttcacaaatcagatcgatgggaaacttgttccagttgaatctatg
gcgcgagctgcaactcatcgaacacatgaagtgactgttaatgcagaaaaagaagtggga
aaaatcaattcttctaatgtacctggaaccgaacggcaatctctacttggaaaaaatctg
aagatgatgggattcaatttaaagaattcgtctatgaaattcccaactaagtccagaaga
atgctgccaaactgtttgcaagggatgaacaaaaccagtacatcttcagatcatcaacaa
actaaaaagcttcatgttatttctgatgcgtctgatgatgattttgtatga
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