Oryza glaberrima (African rice): 127762384
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Entry
127762384 CDS
T08853
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogl01009
]
127762384
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127762384
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
127762384
Protein phosphatases and associated proteins [BR:
ogl01009
]
HAD phosphatases
Fcp/Scp phosphatases
127762384
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127762384
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
Motif
Other DBs
NCBI-GeneID:
127762384
NCBI-ProteinID:
XP_052142845
LinkDB
All DBs
Position
2:24915078..24924614
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AA seq
941 aa
AA seq
DB search
MIRSMVYFGNTSIGEVEVWPSGDASLAAAAWAREIRVDRLSPPSERCQPLAVMHTVAVGA
RCLVMESRPPKAADEPPQPLVAMHAACLKENKTAVVPLGEEELHLVAMTSRRNLTNHACF
WGYKVPFGLYNSCLTMLNLRCLGIVFDLDETLIVANTTRSFEDRIDALQRKLSNETDPQR
ISGMIAEIKRYQDDKSILKQYIEGDQVYDDGKMYKVQPELVPPLSDNHQPMTRPVIRLQE
KNIILTRINPLIRDTSVLVRLRPAWEDLRSYLIARGRKRFEVYVCTMAERDYALEMWRLL
DPDSRLINSVQLNDRMVCVKSGLRKSLLNVFHDGSCHPGMALVIDDRLKVWDEKDQSRVH
VVPAFTPYYAPQAEANCSIPVLCVARNVACNVRGGFFKDFDEGLLPRISNVFYEDEINEI
PFAPDVGNYLISEDENVAAVNGNRDPLAFDGMADAEVERRMKEASGNAQAFTTTAANFVM
PVLPGQNFVSSSVAPVAPSLGMVPLSNNQGPPPPFTQPVAQLSLSDPLQGSPAREEGEVP
ESELDPDTRRRLLILQHGQDTRDPTPPLPAVPPVQVPVPPVQPHGNWFPVEDGMNPNNLN
RGSAGFPLESETMHYDKKQPPHPFFHGGENPISSDRFSYQNQRYPSQLPHSEDHRVLQNH
APSRYRSFPGEELATRHVSSSQRNNQIVPGQHFARHAGSSAGILEEIAMKCGSKVEYRSA
LCDTADLQFSIEVWIVGEKVGEGIGRTRKEAQCQAAEISLRNLANKYLSSDPNKMTGMKE
NGFGSNTNIFGYPGNSRDDVLPIASTSEETRFVKMGENNSRKAGGSIAALKELCTAEGYN
LVFQARTSPDSSVGKEAYAEVEVCGQILGNGVGITWEEAKLQAADEALGMLRSMLGPLAQ
KRSSSPRSLAPSFDKRFKPDFPRAVQRVPYGRYSRIEGHVP
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggtcgatggtatatttcgggaacacctccatcggcgaggtggaggtgtggccc
agcggcgacgcgagcctggcagcggcggcgtgggctcgagagatccgcgttgaccgcctt
tccccgcccagcgagcggtgccagccgctcgccgtgatgcataccgtggccgtcggtgct
cgctgcctcgtcatggagtccaggccgcccaaggcagcggatgagccaccccagcctctc
gtcgccatgcacgctgcttgcctcaaggaaaacaagactgcagttgttccactaggagag
gaagaattgcatttagtggcaatgacatccaggagaaacctgacaaatcacgcatgtttc
tggggatataaagtgccatttggtttgtacaattcttgcttgactatgttaaatctccgg
tgccttgggatcgtatttgaccttgatgagacactgattgtcgccaatactacacggtct
tttgaggacagaattgacgcgcttcagagaaagttgagcaatgagactgatccacagcgc
ataagcggtatgatagcggagattaagaggtaccaagatgataagtctatcctaaagcag
tacattgaaggtgatcaggtctatgatgatggaaaaatgtataaagtgcaacctgagttg
gttccgccattatccgataaccatcaaccaatgacacgtccagttatacgattacaagag
aagaatattatcttgacgagaataaatcctttgataagggataccagtgttcttgtacgt
ttaaggccagcatgggaggatctccggagctacttgattgctagaggtcgcaaacgtttt
gaggtctatgtgtgtacaatggctgagagagactacgccttagaaatgtggaggttgctt
gatccagactcaagattgattaactctgttcaacttaatgacagaatggtgtgtgtaaaa
tctggattaagaaagtccttgctgaatgttttccatgatggatcctgccatcctggaatg
gccctagtaattgatgaccgactcaaagtctgggatgagaaggatcaatctagagttcat
gtggttcctgcattcactccatattatgcaccacaagcagaggcaaactgttctatccca
gttctctgtgtcgccaggaatgttgcatgcaatgttagagggggcttctttaaggacttt
gatgaaggcctcttaccaagaattagcaatgttttttatgaggatgaaatcaatgaaatc
ccatttgctccagatgttggcaattatttgatttcagaggatgagaatgttgcggccgtg
aatggaaacagggatccattggcttttgatggtatggctgatgctgaggttgaaaggaga
atgaaggaagcatctggaaatgctcaagcttttactacaacagcagctaactttgtgatg
ccagtactccctggtcaaaatttcgtttcatcttcagtagcaccagtagccccatccctt
ggcatggtgcctttgagtaataatcagggtccaccacctccattcacccaaccagttgct
caactgagtctctcagatccactgcaaggctctccagctagggaagagggtgaagttcct
gagtcggagttagatcctgacacaaggagaagacttcttatattacaacatggtcaagac
accagagatcctacacctcctcttccagcagtacctcctgttcaagtcccagttcctcca
gttcaacctcatggaaattggtttcctgtagaggatggcatgaatccaaataatctaaac
aggggttctgcagggttccctttggaatctgaaactatgcactatgataaaaagcaacca
cctcacccattctttcatggtggggaaaaccctatatcctctgatagatttagttatcag
aaccagaggtatccctcccagctaccgcatagtgaggatcatcgcgttcttcagaaccat
gcaccgtcaagatacagatccttccctggagaggagctagcaactcggcatgtttcttca
agtcagagaaacaaccagatagtaccaggacaacactttgctcggcatgcagggagctct
gctggcatactagaggagattgctatgaagtgtggttctaaggtggagtacaggtcagca
ctatgtgatactgcggatttacagttctcaatcgaggtttggattgttggagaaaaagta
ggcgaaggcattggcaggacaaggaaagaagcacagtgtcaagctgcagaaatctcatta
agaaatttagctaataaatatctgtcatctgatccgaataagatgactggtatgaaagaa
aacggttttggtagcaatacaaacatttttggataccctggaaatagtagggacgatgtg
ttaccaattgcaagtacttcagaagaaactcgctttgtgaagatgggggagaacaattcc
agaaaagcaggaggttctattgctgctctcaaggaactttgcacagctgagggatataac
ttagtttttcaagctcggacatctcctgatagttcagtaggcaaagaagcttatgctgag
gtagaagtttgtgggcaaattctaggcaacggagtgggaataacatgggaagaagctaag
cttcaggctgctgatgaagctcttggaatgttgagatccatgcttggtccacttgctcag
aaacggtccagttctccaaggtcactggcacccagttttgataagcgcttcaagccagat
tttccacgggcagtgcaaagggttccttatggtagatattcccgaattgaaggccatgtt
ccttga
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