Oryza glaberrima (African rice): 127762746 Help Entry 127762746         CDS       T08853                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ogl  Oryza glaberrima (African rice) Pathway ogl03018   RNA degradation Brite KEGG Orthology (KO) [BR:ogl00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     127762746  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ogl03019]     127762746 Messenger RNA biogenesis [BR:ogl03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      127762746   mRNA degradation factors    5'-3' decay     Decapping complex      127762746 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  127762746 NCBI-ProteinID:  XP_052143189 LinkDB All DBs Position 2:complement(10996691..11004457) Genome browser AA seq 830 aa AA seqDB search MAAQPSSSASTGATKFDASQYAFFGNNAVEEVELGGLEDDDGVDAGFVGPGDEEYPSAYG RDMFEDEGGGSFTGVDDLAGAFSKLTRSINEPTQSGIVSHGGSISRQSSTPDWAQDSYWP TQPIFGAEQGLDNESRWSQPPHLARFADSRLHTTSSSPQQDAQYHPNEHILGAMPSPLHR TSSYPQQEPQYNHTEPIPVPKSSFISYPPSGAVSHSSPGQPHHMNMPSPPTSFQMPVSAQ NELHHPQFPRGGMPPGSLGRNMAHLDSAGLSTNNLQQNALNSGPIRPNGAMLTPGLMQHN LQRPNGLVPPQMLSRRPQHGMAPIQHSPPQFSQFHAHMLGPRHPPPQGRQMYNPQHSSQM MSGFDANLAMPDLSDPRARAMLHHGVHGQHYLPQGFELASMRMDNGWPRFRSKYMSTAEI ENIARMQQAATQINDPYIDDYYHQACLAKKSAGGQLKHHFCPTLIRDPSSRARSKDEPHA YLQVDALGRLPFSSIRRPRPLLDVEQTSESSDDVTEKSASKTLDQEPMLAARITIEDGLC LLLDVDDIDRLLQFSQQQDGGLQLRNRRQALLEQLAESLQLVDPLTPSNNAPLSPNDDLV FLRIVSLPKGRKLLSRYLELVSSGSELARIACMAVFRHLRFIFGNLPSDSSAVETTTKLA TAVSTCVVRLELSGLSACLAAIVCSLLQPPLRPLGHAAGDGASFIIKSVLDRATELLTDQ HVASTYSMQNRALWQASFDAFFGLLTEYCMSKFDSVIHALQTQPAVAAVISREMPVELLR ASLPHTNEYQRKQLLSFAQRTVPVNNHSSHGSNNGPMTSESIPSSESRKI NT seq 2493 nt NT seq  +upstreamnt  +downstreamnt atggcggcgcagccttcttcgtcggcgtcgacgggcgctaccaagtttgatgcatcgcag tatgctttctttgggaacaacgcggtggaagaggttgagctaggtggattggaggatgat gatggtgtcgatgctggttttgttggccctggtgatgaagaatacccttctgcttatgga agggatatgtttgaggatgaaggtggaggttcatttactggtgttgatgatcttgctgga gcattctcaaagttgaccagaagcatcaatgaaccaacacaatcaggaatagttagtcat gggggttcaatttctagacaaagttctactccggattgggcacaagattcatattggcct acgcagcctatatttggagctgaacaagggctggataatgaaagccggtggtctcaaccc ccccatttagcccgctttgctgattctagactgcacacaacatcctcatcgccgcagcaa gatgctcaataccatcctaatgaacatattcttggagcaatgccatctccgttgcataga acttcatcatacccacaacaagagcctcaatacaatcacacagaaccaattccggtacct aaatcatcattcatttcgtaccctccatctggtgcagtatcccattcttcaccaggtcaa ccacatcacatgaacatgccatctcctcccacttcattccaaatgcctgtatctgcacaa aatgagttacaccatccccagtttcctcgtggtggtatgcctccagggtcacttggtcgg aacatggctcatttggattcagcaggtttatcaactaataatttgcaacagaatgctcta aacagtgggccaattcgtccaaatggtgccatgcttacaccaggtttgatgcagcacaat ctgcagcgtccaaatggattggtcccacctcaaatgctgtcacgccgtccacaacatgga atggccccaattcaacactctccgccacaattctcacagttccatgctcatatgcttggt cctcggcatcctccaccacaaggtcgtcagatgtacaatcctcagcattcatcacaaatg atgagtggatttgatgcaaatttggcaatgcctgacttgagtgatccgagagcaagagca atgctgcaccatggagtgcatggccagcattatctcccccaaggttttgagcttgccagt atgaggatggataatgggtggccgcggttcagatccaagtacatgtccacggctgaaatt gagaacattgcaaggatgcagcaagctgctactcagatcaatgatccgtacattgatgat tactatcatcaagcctgtttagctaaaaagtcagccggaggtcaactcaagcaccacttc tgtccgaccttgattagagatccatcatcccgtgcacggagtaaagatgagccacatgca tatctccaggttgatgctcttggaaggttgccattttcttccatccgcaggcctcgtccg ctcctcgatgttgaacaaacctctgaatcaagtgatgacgttactgaaaaatctgcttca aaaacacttgaccaagaaccaatgctggctgctaggatcacaattgaagatggcctttgc ctactgcttgatgtagatgatattgatcgcttgctgcaatttagccagcagcaagatggt ggcttgcaactgagaaacaggagacaggccctccttgagcagctggcagaatcgctgcaa ctagttgatccacttacacctagtaacaatgcacctctctcaccaaatgatgatctggtg tttctccgaatagtctctcttccgaagggccgcaaactactttctcgttaccttgaactt gtgagttctggcagtgagcttgctagaattgcttgcatggcagtcttccggcatctaaga ttcatatttggaaatttgccatctgatagtagtgctgttgagacaacgacaaaacttgct actgctgtatcaacctgtgttgttcggttggagttgagtggactaagtgcttgccttgca gctattgtgtgttctttgttgcaaccccctctgcgaccccttggacatgctgcaggtgat ggggcttctttcatcataaagtctgtactggacagagcaacagagcttctcactgatcag catgtggcctctacctacagcatgcaaaacagagctctatggcaagcatcatttgatgcc ttctttgggctgcttacagagtattgcatgagtaaattcgatagtgtgattcatgcattg caaacacaacctgctgtggcagcagttataagcagggaaatgccagttgaattgttgcgt gccagccttcctcacacaaatgagtatcagcggaaacagttgctcagttttgctcagcgc acggtgcctgttaacaaccatagttctcatgggtccaataatggacccatgacatcagaa tctatcccaagttcagaaagccggaaaatataa

DBGET integrated database retrieval system