Oryza glaberrima (African rice): 127762747 Help Entry 127762747         CDS       T08853                                  Name (RefSeq) protein PAT1 homolog   KO K12617   DNA topoisomerase 2-associated protein PAT1 Organism ogl  Oryza glaberrima (African rice) Pathway ogl03018   RNA degradation Brite KEGG Orthology (KO) [BR:ogl00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     127762747  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ogl03019]     127762747 Messenger RNA biogenesis [BR:ogl03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      127762747   mRNA degradation factors    5'-3' decay     Decapping complex      127762747 SSDB OrthologParalogGFIT Motif Pfam:  PAT1 Motif Other DBs NCBI-GeneID:  127762747 NCBI-ProteinID:  XP_052143190 LinkDB All DBs Position 2:complement(10934908..10943731) Genome browser AA seq 830 aa AA seqDB search MAAQPSSSASTGDTKFDASQYAFFGNNAVEEVELGGLEDDDGIDAGFVGPGDKEYPSAYG RDMFEDEGGGSFTGVDDLAGAFSKLTRSINEPTQSGIISRGGSISRQSSTPDWAQDSYWP TQPIFGAEPGLNNESRWSQPPHLARFADSRLHRTSSSPQQDAQYNPNEHILGAMPSPLHR TSSYPQQEPQYNHTEPIPVPKSSFIPYPPSGAVSHSSPGQPHNMNMPSPPTSFQMPVSAQ NELHHPQFPRGGMPPGPLGRSMAHLDSAGLSTNNLQQNALNSGPVRPNGAMLTPGFMQHN LERPNGLVPPQMLSRRPQHGMAPIQHSPPQFSQFHAQMLGPRHPPPQGRQMYNPQHPSQM MSGFDANLAMPDLSDPRARAMLHHGVHGQHYLPQGFELAGMRMDNGWPRFRSKYMSTAEI ENIARMQQAATQINDPYIDDYYHQACLAKKSAGGQLKHHFCPTLIRDPSSHARSKDEPHA YLQVDALGRLPFSSIRRPRPLLDVEQTSESSDDVTEKSASKTLDQEPMLAARITIEDGLC LLLDVDDIDRLLQFSQQQDGGLQLRNRRQALLEQLAESLQLVDPLTPSNNAPLSPNDDLV FLRIVSLPKGRKLLSRYLELVSSGSELARIACMAVFRHLRFIFGNLPSDSSAVETTTKLA TAVSTCVVRLELSGLSACLAAIVCSSLQPPLRPLGHAAGDGASFIIKSVLDRATELLTDQ HVASTYSMQNRALWQASFDAFFGLLTEYCMSKFDSVIHALQTQPAVAAVIGREMPVELLR ASLPHTNEYQRKQLLGFAQRTVPVNNHSSHGSSNGPMTSESIPSSESWKI NT seq 2493 nt NT seq  +upstreamnt  +downstreamnt atggcggcgcagccttcttcgtcggcatcgacgggcgataccaagtttgatgcgtcgcag tatgctttctttggcaacaacgcggtggaagaagttgagctgggtggattggaggatgat gatggtattgatgctggttttgttggtcctggtgataaagaatacccttctgcttatgga agggatatgtttgaggatgaaggtggaggttcatttactggcgttgatgatcttgctgga gcattctcaaagttgaccagaagcatcaatgaaccaacacaatcgggaataattagtcgt gggggttcaatttctagacaaagttctactccggactgggcacaagattcatattggcct acacagcctatatttggagctgaaccagggctgaataatgaaagccggtggtctcaacca cctcatttagcccgctttgctgattctagactgcacagaacatcctcatcgccgcagcaa gatgctcaatacaatcctaatgaacatattcttggagcaatgccatctccgttgcataga acttcatcatacccacaacaagagcctcaatacaatcacacagaaccaattccggtacct aaatcatcattcattccgtaccctccatctggtgcagtatcccattcttcgccaggtcaa ccacataacatgaacatgccatctcctcccacttcattccaaatgcctgtatctgcacaa aatgagttacaccatccccagtttcctcgtggtggtatgcctccagggccacttggtcgg agcatggctcatttggattcagcaggtttatcaactaataatttgcaacagaatgctcta aacagtgggccagttcgaccaaatggtgccatgcttacaccaggtttcatgcagcacaat ctggagcgtccaaatggattggtcccacctcaaatgctgtcacgccgtccacaacatgga atggccccaattcaacactctccgccacaattctcacagttccatgctcagatgcttggt cctcggcatcctccaccacaaggtcgtcagatgtacaatcctcagcatccatcacaaatg atgagtggatttgatgcaaatttggcaatgcctgacttgagtgatccgagagcaagagca atgctgcaccatggagtgcatggccagcattatctcccccaaggttttgagcttgctggt atgaggatggataatgggtggccgcggttcagatccaagtacatgtccacggctgaaatt gagaacattgcaaggatgcagcaagctgctactcagatcaacgatccgtacattgatgat tactatcatcaagcctgtttagctaaaaagtcagcaggaggtcaactcaagcaccacttc tgtccgaccttgattagagatccatcatcccatgcacggagtaaagatgagccacatgca tatctccaggttgatgctcttggaaggttaccattttcttccatccgcaggcctcgtcca ctcctcgatgttgaacaaacctctgaatcaagtgatgacgttactgaaaaatctgcttca aaaacacttgaccaagaaccaatgctggctgctaggatcacaattgaagatggcctctgc ctactgcttgatgtagatgatattgatcgcttgctgcaatttagccagcagcaagatggt ggcttgcaactgagaaacaggagacaggccctccttgagcagctggcagaatccctgcaa ctagttgatccacttacacccagtaacaatgcacctctctcaccaaatgatgatctggtg tttctccgaatagtctctcttccgaagggccgcaagctactttctcgttaccttgaactt gtgagttctggcagtgagcttgctagaattgcttgcatggcagtcttccggcatctaaga tttatatttggaaatttgccatctgatagtagtgctgttgagacaacgacaaaacttgct actgctgtatcaacctgtgttgttcggttggagttgagtggactaagtgcttgccttgca gctattgtgtgttcttcgctgcaaccccctctgcgaccccttggacatgctgcaggtgat ggggcttctttcatcataaagtctgtactggacagagcaacagagcttctcactgatcag catgtggcctctacctacagcatgcaaaacagagctctatggcaagcatcatttgatgcc ttctttgggctgcttacagagtattgcatgagtaaattcgatagtgtgattcatgcattg caaacacaacctgctgtggcagcagttataggcagggaaatgccagttgaattgttgcgt gctagccttccccacacaaatgagtatcagcggaagcagttgctcggttttgctcagcgc acggtgcctgttaacaaccatagttctcatgggtccagtaatggacccatgacatcagaa tctatcccaagttcagaaagctggaaaatatga

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