Oryza glaberrima (African rice): 127762775
Help
Entry
127762775 CDS
T08853
Name
(RefSeq) pentatricopeptide repeat-containing protein OTP51, chloroplastic
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127762775
Spliceosome [BR:
ogl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127762775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
PPR_1
ARM_TT21_N
Leuk-A4-hydro_C
Motif
Other DBs
NCBI-GeneID:
127762775
NCBI-ProteinID:
XP_052143224
LinkDB
All DBs
Position
2:27932442..27936097
Genome browser
AA seq
790 aa
AA seq
DB search
MATTSPCAAPSPSLRCPLALSHPFASPPPPPALRLAGPKLLPGRLAVSPPPGIPAVASAL
ESLILDLDDDEEDEDEETEFGLFQGEAWAAADEREAVRSPELVVPELEELPEQWRRSRIA
WLCKELPAYKHSTFTRILNAQRKWITQDDATYVAVHCLRIRNNDAAFRVYSWMVRQHWFR
FNFALATRVADCLGRDGKVEKCREVFEAMVKQGRVPAESTFHILIVAYLSVPKGRCLEEA
CTIYNQMIQMGGYKPRLSLHNSLFRALVSKTGGTAKYNLKQAEFVYHNVVTTNLDVHKDV
YAGLIWLHSYQDVIDRERIIALRKEMKQAGFDEGIDVLVSVMRAFSKEGNVAETEATWHN
ILQSGSDLPVQAYVCRMEAYARTGEPMKSLDMFKEMKDKNIPPNVASYHKIIEIMTKARE
VDIVEQLMNEFIESDMKHLMPAFLDLMYMYMDLDMHEKLELTFLKCIARCRPNRILYTIY
LESLVKVGNIEKAEEVFGEMHNNGMIGTNTKSCNIMLRGYLSAEDYQKAEKVYDMMSKKK
YDVQADSLEKLQSGLLLNKKVIKPKTVSMKLDQEQREILIGLLLGGTRMESYAQRGVHIV
HFQFQEDSNAHSVLRVHIHERFFEWLSSASRSFDDGSKIPYQFSTIPHQHFSFFADQFFL
KGQPVLPKLIHRWLTPRVLAYWFMFGSSKLPSGDIVLKLSGGNSEGVERIVNSLHTQSLT
SKVKRKGRFFWIGFQGSNAESFWRIIEPHVLNNFASLVTQEGSSIGSDGTQDTDTDSDDD
VQMSDTERDE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacctctccctgcgccgcgccatccccatcgctacgatgccctctcgcgctc
tcccaccccttcgcctctcctcctcctcctcccgccctccgtctcgccggcccgaagctt
ctccccggccgcctcgccgtgtccccgcctccaggaatcccagcggtagcgtcagcgctg
gagtccctaatcctggatttggacgacgacgaggaggatgaggacgaggagaccgagttt
gggctgttccagggagaggcgtgggcggcggccgacgagagggaagcggtgaggtcgccg
gagctggtggtgcccgagctggaggagctgcccgagcagtggcgccgctccaggatcgcc
tggctctgcaaggagctccccgcctacaagcactccaccttcacccgcatcctcaacgcc
cagcgcaagtggatcacccaggacgacgccacctacgtcgccgtccattgcctccgcatc
cgcaacaacgacgctgccttccgggtgtatagctggatggtacggcagcactggttccgc
ttcaactttgcactagccaccagggtggcagattgccttgggagggatgggaaggttgag
aaatgccgggaggtgtttgaggcgatggtcaagcagggccgtgtgcctgcagagtctacc
ttccacatactgattgttgcttacctcagtgtacctaaagggcgttgccttgaggaggca
tgcactatctacaaccagatgatacagatgggtggttacaagcctcgccttagccttcat
aactccttgttccgtgcgcttgttagtaagacagggggaactgcaaagtacaatctcaag
caggctgagtttgtgtaccataatgtggtcaccaccaatcttgatgtgcacaaggatgtc
tacgctgggctcatctggcttcacagctaccaggatgtcattgatagagaaaggatcata
gctcttaggaaggagatgaagcaagcaggctttgatgagggtattgatgtgctggtgtca
gtgatgagggccttttccaaggaagggaatgttgcagaaacagaggccacgtggcacaat
attcttcagagtggttctgacctccctgttcaggcctatgtctgccgaatggaggcttat
gcccggactggtgagcctatgaaatctctcgatatgttcaaggaaatgaaggataaaaat
atacctcctaatgttgcatcatatcataaaataattgagataatgacaaaagctcgggaa
gtagatatcgtggaacaacttatgaatgaatttattgagagtgatatgaagcatttgatg
ccagccttccttgacttgatgtacatgtacatggatctggatatgcatgaaaagttagaa
ttaacattcttaaaatgcatagccaggtgccgtccaaacagaatattgtacaccatttat
ctggaatcactagtaaaggttggaaatatcgagaaggctgaggaggtatttggtgaaatg
cacaataatgggatgataggtactaacacgaagtcgtgcaacattatgctaagaggttat
ctttctgcagaagactatcagaaagccgaaaaggtttatgatatgatgagtaaaaagaaa
tatgatgtacaggcagactctttggaaaagctccaaagtggtctccttctcaacaagaaa
gttattaaaccaaaaactgtgagcatgaagctggatcaagagcagcgtgaaattttaatt
ggtttgcttctgggaggcactcgaatggaatcttatgcacagcgaggggtccatattgtg
cactttcagttccaggaagattccaatgctcattcagttttaagggtgcacattcatgag
cgtttctttgaatggttgtcttcagcaagcagatcattcgatgatgggagcaagataccc
tatcagttttcaacaatacctcaccagcatttcagtttctttgctgaccagttctttctg
aaaggtcagcctgtgctcccaaagcttatccataggtggttaactccacgtgttctagca
tattggttcatgtttggaagctccaaactcccatcaggtgatattgttcttaagctcagt
ggtgggaacagcgagggtgttgagagaattgtgaactccctgcacacacagtcgttaaca
agtaaagtgaagaggaaggggagattcttttggataggttttcagggtagcaatgctgaa
tctttctggagaattatagagcctcatgttttgaacaattttgcgagtttagtaacacag
gaaggtagcagcataggctctgatggtacccaagataccgacactgattctgacgatgat
gtgcaaatgtccgatacagaaagagacgagtga
DBGET
integrated database retrieval system
