Oryza glaberrima (African rice): 127763051
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Entry
127763051 CDS
T08853
Name
(RefSeq) transcription factor IIIA-like
KO
K09191
general transcription factor IIIA
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127763051
03021 Transcription machinery [BR:
ogl03021
]
127763051
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127763051
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
127763051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPR
PPR_2
PPR_1
zf-C2H2
PPR_3
zf-C2H2_4
Zap1_zf1
PPR_long
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
127763051
NCBI-ProteinID:
XP_052143586
LinkDB
All DBs
Position
2:complement(773607..779162)
Genome browser
AA seq
672 aa
AA seq
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MYCRCGKFEPARTVFDRMLVKDEVTWGSMLYGYMKCVGVDSALSFFYQMPMKSTVSWTAL
ITGHVQDKQPIQALELFGKMLLEGHRPTHITIVGVLSACADIGALDLGRAIHGYGSKSIA
TTNIIVTNALMDMYAKSGSIASAFSVFEEVQMKDAFTWTTMISSFTVQGNGRKAVELFWD
MLRSGILPNSVTFVSVLSACSHAGLIQEGRELFDKMREVYHIDPRLEHYGCMVDLLGRGG
LLEEAEALIDHMDVEPDIVIWRSLLSACLAHGNDRLAEIAGKEIIKREPGDDGMCSGDDI
DGDTRVEATQHRDIRRYKCEFCTVVRSKKCLIRAHMVAHHKEELDKSEIYKSNGEKVVHE
GDHTCQECGASFQKPAHLKQHMQSHSDERSFICPLEDCPFSYIRKDHLNRHMLKHQGKLF
TCSMDGCGRKFSIKANMQRHVKEIHEDETATKSNRQFVCKEEGCNKVFKYASKMKKHEES
HVKLDYVEVVCCEPGCMKTFTNVECLRAHNQACHQYVQCDICGEKHLKKNIKRHLRAHEE
VPSTERIKCSFEGCECSFSNKSNLTKHIKASHDQVKPFACRFTGCEKVFPYKHVRDNHEK
SSAHVYTQANFTEMDEQLLSCPRGGRKRKAVTVETLTRKRVTMHGDASSLDNGTEYLRWL
LSGGDDDSSQTH
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtattgtcgatgtggcaagtttgagcctgcacggactgtatttgatagaatgcttgta
aaagatgaggtcacttggggtagcatgctgtatggttacatgaagtgtgttggtgtggat
tcagctttgtcattcttttatcagatgcctatgaagagcactgtttcttggacagcactg
atcactggtcatgttcaagacaagcagcctatccaagctcttgagctatttggtaagatg
cttttggagggccaccgtcctacccatattacaattgtaggggtgctatcagcttgtgct
gatattggtgctttggatcttggacgtgccattcatggatatggaagcaaatctattgcc
accaccaatataattgttacaaatgctctgatggatatgtatgcaaagagtggaagcatt
gctagtgcattttctgtatttgaagaagttcagatgaaggacgcattcacatggacaact
atgatttcaagtttcactgtccagggtaatgggaggaaagctgttgagctcttttgggat
atgctaaggtctgggatacttccaaacagtgtgacattcgtctcagttttgtcagcatgc
agccatgctgggttaatacaagaaggcagagagttatttgataaaatgcgtgaagtctac
catattgatccccggcttgagcactatggatgcatggttgatctgttaggacggggtgga
cttctagaagaagcagaagctctgatagatcatatggatgtcgagcctgatattgttatt
tggaggtcacttcttagtgcatgcctagctcatggcaatgatagattagctgagattgct
ggaaaggaaattataaagagagaacctggggatgatgggatgtgctctggagatgatatt
gatggagacacgagggttgaagcaacacaacacagggatataaggcgctacaagtgtgaa
ttttgcacggttgttaggtccaaaaaatgtctcatccgagctcacatggttgctcatcat
aaggaagaactggacaaatcggaaatctacaagtcaaatggggaaaaggttgttcatgaa
ggtgaccacacctgccaagagtgtggtgcttctttccagaagccagctcatctgaagcag
catatgcaaagtcactctgatgagagatcgttcatttgcccacttgaagactgccctttc
agctacattaggaaagatcacttgaaccgtcatatgcttaagcatcaagggaagttgttt
acctgctctatggatggttgtggtaggaagttcagtataaaggcaaatatgcaaaggcat
gtaaaggaaatccatgaggatgaaactgctactaaaagcaaccggcagtttgtttgcaag
gaggagggctgtaacaaggttttcaagtatgcttcaaagatgaagaaacatgaagaatca
catgtgaaattggactacgtggaagtagtctgctgtgaaccaggctgcatgaagacattc
acaaatgttgaatgtttgagggctcataatcaggcttgccatcaatatgttcagtgtgat
atctgtggggaaaaacacctgaagaagaacattaaaaggcacctacgagcccatgaggag
gtgccatctactgaaaggataaaatgcagttttgagggctgtgaatgctctttttccaat
aaatcaaatttaaccaaacatataaaggcgtcccatgatcaagtaaaacctttcgcatgt
cgattcacggggtgtgaaaaggtgtttccatacaagcatgtcagggacaaccatgagaaa
tccagcgctcatgtatacactcaggcaaacttcacggagatggacgagcagttactctcg
tgtccgagaggtggacggaagaggaaagctgtgactgtcgaaactcttacgcgcaagagg
gtgaccatgcacggcgacgcttcgtcgttggacaatggaactgagtacctgcgctggttg
ctttctggtggggatgatgattcgagccaaactcattag
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integrated database retrieval system
