Oryza glaberrima (African rice): 127763133
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Entry
127763133 CDS
T08853
Name
(RefSeq) protein argonaute 1C
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127763133
03036 Chromosome and associated proteins [BR:
ogl03036
]
127763133
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
127763133
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
127763133
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
127763133
microRNA pathway
RISC loading complex
127763133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
SURF2
Motif
Other DBs
NCBI-GeneID:
127763133
NCBI-ProteinID:
XP_052143712
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All DBs
Position
2:complement(34282575..34289645)
Genome browser
AA seq
1017 aa
AA seq
DB search
MASRRPTHRHHTEAPDPGGRGRGRGRGRGRAARYAQPQPQPQQQQQQQQQQGRGCRARGA
SPPPPPQQQQQQPRSTPTRATTVTVASSSSTTATASSSPLAPELRQAIMEAPRPSELAQP
SPTPPQEQPVDAATTTPHHIPSSSKSIRFPLRPGKGTIGTRCMVKANHFFAHLPNKDLHH
YDVSITPEVTSRIVNRAVIKELVNLYKASYLGGRLPAYDGRKSLYTAGPLPFTSQEFQIT
LLDDDDGSGSERRQRTFRVVIKFAARADLHRLELFLAGRHAEAPQEALQVLDIVLRELPS
ARYAPFGRSFFSPYLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSATAFIEPLPVI
DFVAQLLNSDIHSRPLSDAERVKIKKALRGVKVEVTHRGNMRRKYRISGLTIQPTRELTF
PVDEGGTVKSVVQYFQETYGFAIQHTYLPCLTVQRLNYLPMEVCKIVEGQRYSKRLNQNQ
IRALLEETCQHPRDRERDIIKMVKHNAYQDDPYAKEFGIKISDRLASVEARILPAPRLKY
NETGREKDCLPRVGQWNMMNKKMVNGGKVRSWMCVNFARNVQESVVRGFCHELALMCQAS
GMDFAPEPILPPLNARPDQVERALKARYHDAMNVLGPQRRELDLLIGILPDNNGSLYGDL
KRVCEIDLGIVSQCCCTKQVFKMNKQILANLALKINVKVGGRNTVLVDAVSRRIPLVTDR
PTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIEDLYKIWQD
PQRGTVSGGMIRELLISFKRSTGEKPQRIIFYRDGVSEGQFYQVLLYELNAIRKACASLE
ANYQPKVTFIVVQKRHHTRLFAHNHNDQNSVDRSGNILPGTVVDSKICHPTEFDFYLCSH
AGIKGTSRPAHYHVLWDENNFTADALQILTNNLCYTYARCTRSVSIVPPAYYAHLAAFRA
RFYMEPDTSDSSSVISGPGVRGPLSGSSTSRTRAPGGAAVKPLPALKDSVKRVMFYC
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacggaggccaacgcaccgccaccataccgaggctccagatcctggtggaaga
gggagagggagagggagagggagaggccgtgccgcccgatatgctcagcctcagcctcag
cctcagcagcagcagcagcagcagcagcagcaaggacgaggatgccgtgctagaggtgcc
tcgccgccgccgccgccgcagcagcagcagcaacagccaaggtctactcctactcgtgct
accactgtcaccgtggcttcctcttcatctaccacggccaccgcatcatcaagccctcta
gctcccgagctgcgccaagcaataatggaagctccccgtcccagtgagctcgctcaaccc
tcacccactccgcctcaggaacaacctgtggatgccgctaccacgacgccgcaccatatt
ccatcctcaagcaagtcaattaggtttcctttgcgcccggggaagggtaccattggcacc
aggtgcatggtcaaggccaatcatttcttcgctcacctgcccaacaaggatcttcatcac
tacgatgtctccatcactccagaagttacatcacgcattgttaaccgagctgtgatcaag
gagctggtaaatctgtacaaggcatcttatctgggtgggaggctgcctgcatatgatggt
agaaagagcttatacacggctggcccattgccgtttacttcacaggagtttcagatcact
ttacttgacgacgatgatggttctggttctgagaggcgacagaggactttccgagtagta
atcaagttcgccgcacgggccgaccttcatcggcttgagttgtttttagctgggaggcac
gcagaagctccacaggaggcactgcaagttcttgatattgtgctgcgagagctaccatca
gcaagatatgcgccatttggacgttccttcttttcgccttacttgggtaggaggcaaccc
cttggtgagggattggaaagctggcgtggattttaccagagcattcggcctactcagatg
ggcttatcactgaatattgatatgtcagctacagctttcattgagccgttacctgttatt
gattttgttgcacaactattgaattctgacatccattcaaggccgctttctgatgccgaa
cgtgttaagatcaagaaagccttgagaggagtaaaggtggaagttacccaccgtggcaac
atgaggcggaagtaccggatatctggtttgacaattcagccaactcgtgagctaactttt
cctgttgatgaaggaggcacagtgaagtcagttgtacagtactttcaagagacatatggc
tttgccatccaacacacctaccttccatgccttacagttcagcgattaaattacctgcct
atggaggtctgcaaaatagtggaaggacagagatactccaagagattaaatcagaatcag
ataagagctcttttggaggagacatgccaacacccacgtgatcgggagcgtgatattatt
aagatggttaaacataacgcttatcaggatgatccttacgcaaaagagtttggcattaag
ataagtgatcgtctggcatcagtagaggcacgaattttaccggctccacggcttaagtac
aatgagactggtcgagagaaggattgcttaccaagagttggtcaatggaatatgatgaac
aagaaaatggtaaatggtggtaaagtcagaagctggatgtgcgtcaattttgcccgtaat
gtgcaggaaagtgttgttcgtgggttctgccatgaacttgctctgatgtgtcaagcctca
ggaatggatttcgctccagaacctattcttccaccactaaatgcacgtccagatcaagtg
gagcgtgctctaaaagctaggtatcatgatgcaatgaacgttcttggaccccagcgcagg
gaacttgatttgcttattgggatactacctgataacaatggctcgctttatggtgatttg
aagcgcgtgtgtgaaatagatcttggaatagtttcacaatgctgttgcacgaagcaggtg
ttcaaaatgaacaaacaaattcttgcaaatcttgctctgaagataaatgtcaaggttggg
ggcaggaacactgtgctggtggatgctgtgtcaaggcgtattcctctggtaaccgacaga
cctacaattatatttggtgctgatgttacccatcctcatcctggagaggacagcagtccc
tcaattgctgctgttgtagcctcccaagattggcctgaggtgacaaagtatgctgggttg
gtttctgctcaagcccaccgacaagagctgatagaagatctatataaaatctggcaggat
ccacagagaggaacagttagtggtggcatgatccgtgagctgcttatatccttcaaaaga
tcaactggtgagaagccccagcgaataatattttacagggatggcgttagtgaaggccaa
ttttaccaagttctactttatgaattgaatgcaatccgaaaagcatgtgcctccctggag
gcaaattaccaaccaaaggtgactttcattgtggttcagaaacgtcaccacacaagatta
tttgcacataatcacaacgatcagaactcagttgacaggagcgggaacatactccctggt
acggttgtagattcaaagatctgtcatccaactgagtttgacttctacctgtgtagccat
gctggcattaagggtactagtcgtccagctcattatcatgtcttgtgggatgaaaacaac
ttcacagctgatgcattgcagattcttaccaacaacctttgctacacctatgcaaggtgc
actcgctctgtatcaattgttccacctgcttattatgctcatctggctgccttccgtgct
cgtttctatatggaaccagatacatctgacagcagctctgtcattagtgggcctggtgta
cgtgggccactttctggctcatcaacatcacgtactcgggcccctggtggtgcagctgtt
aagccacttcctgctctgaaggatagtgtgaagagggtcatgttctactgctga
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