Oryza glaberrima (African rice): 127763169
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Entry
127763169 CDS
T08853
Name
(RefSeq) ATP-dependent DNA helicase MER3 homolog isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogl03036
]
127763169
Enzymes [BR:
ogl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127763169
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Meiosis-specific proteins
Others
127763169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_C
HHH_5
ResIII
AAA_22
Cdd1
Motif
Other DBs
NCBI-GeneID:
127763169
NCBI-ProteinID:
XP_052143753
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All DBs
Position
2:23840443..23849505
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AA seq
1313 aa
AA seq
DB search
MDYSYLHRDSSASTNRREPASNANQNLKFLSVAIIHGSSPPPPPPPPHLETPEALSARGF
SCHSFSHLRSLAKQPLLSLAISPTPPVQIPPPPPPLQIRFHQPAGPHAMAAMGHLGDPYA
LRSVADLPPPFRSVFGFRYFNSLQSECFPACFLSDVNMVISAPTGSGKTVLFELCILRLL
SRFLSSEWRFNLIKGTLKTIYIAPMKALVQEKLRDWNMKLGSLGISCLEMTGDNEFYNTK
SIHDADLILTTPEKFDSVSRHGIRDGGLGFFSDIALVLIDEVHLLNDPRGAALEAIVSRI
KMLSRLGTMKIAPLANVRFIAVSATIPNIEDIAEWLAVPSEGIKRFGEEMRPVKLTTKVF
GYAPARNDFLFERRLQSFIFDILMQHSRGKSALVFCSTRKGAQEAAQCLSQTASSLGYSN
PFMKSMQQYEHLKEAALTCSDKQLQACLVHGVGYHNGGLCLKDRSVVEGLFLKGDIQILC
TTNTLAHGINLPAHTVVIKSTQFFNKEKGLYVEYERSMVLQMCGRAGRPPFDDTGTIIIM
TRRETVHLYENLLNGCEMVESQLLPCAVEHLNAEIVQLTVSDITLAIEWLKCSYLYIRIK
KNPQHYGIKKEIPCELLEKQMKDICVEKIHELGEYGLIWTDEDGFLLKPLEPGRLMTKFY
LKFDTMKLIVKASACCTLEDLLHIICHSAEITWIQLRRNEKKLLNEINADKEGRLWFHVV
GANGKRKKRIQTREEKIFILANDCLTGDPLVHDLSLNQEMNSICSNGCRVAKCMREYFIY
KKNYKSAISSMLLAKCLHQKLWESSPFLLKQLPGIGIVTAKALKTAGIDSFESLATADAR
KIESVTGRNYPFGDSIKSYLPSLGPKIDINIEDAGNRQGKSTIIVTLTRLSQAVGSSKQN
YADMVVGSEEDNAILFHEKIKTQEFSSPYSVKLYVPCPPNARATLKVDVIFEEYVGLDIH
KKHVVSREDFHVTKVFGIKKAEPLYNLPAESCLVSSKTTRTNQSKYHNGQNPLSKEVCVI
EDDFRAKAPDKADNDLEILGTREYNNLASLEAPSFTLLHEEDYEDVPDVLASEPVEAECK
SATNNTIFDHIRKKSRDFPNLMLSKSMDSSYEPLILKKMKTSGDQFGLDQSSLHAYEVTP
MVFDRTEARVSPTNTDERCRNILTRTAETRSFQFTGKMDSISQKSEILNRTQGKNSTQLA
GKKAFEKSKTPDENSLHFVGKRDSSSEKSKALSKTPDENSLQFLGKMDNSSEKSKFCFSS
PLADFQPMQCTKQVAASVQPLTIQDYCKDILASAKSSGTGASFLDVKSVFSFL
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggactactcctacctgcatcgagacagtagcgctagcacgaacaggcgtgagccagct
tctaacgcaaaccagaatttgaaattcctttccgttgcaatcatccacggctcatctcct
ccgcctcctcctcctcctcctcacctcgagacaccagaggcattatccgcgcgcggcttc
tcctgccattccttctcccaccttcgttccctcgcgaagcagccgctcctctctctcgcc
atctctccgactcctccggtccaaataccccccccccctccccccctccaaatccggttc
caccaaccagcaggaccgcacgcgatggcggcgatgggacatctcggcgacccgtacgcg
ctgcgctccgtcgcggaccttcccccgccattccgctccgttttcgggttcaggtatttc
aattcgttgcagagcgagtgcttccctgcatgcttcctctcggatgtaaacatggttatc
tctgcgcctactgggagtggcaaaaccgtgctgttcgagctctgcattctaaggcttctc
tcaaggttcctctcatcagagtggaggtttaatttgatcaaaggaaccctgaaaacaatc
tatattgctccaatgaaggcgttggtgcaggagaagttgcgtgactggaacatgaagctg
ggctcgttggggatcagttgcttggagatgactggtgacaatgaattctataacaccaaa
tccatacatgatgctgacttaattctcacaactcctgagaagtttgattctgtgagtcgt
catggaataagagatggtggactgggtttcttcagtgacattgctctggtccttattgat
gaagttcatctcctcaacgatcctcgtggagctgccctagaagcaattgtcagtagaata
aaaatgctttctcgacttggcacaatgaagattgctcctttggcaaatgttcgattcata
gcagtttctgccactatccctaatattgaggatatagcggagtggcttgcagtaccgtct
gaaggaataaaaagatttggagaagagatgaggccagtgaagttgacaaccaaggttttt
ggttatgctccagcaagaaatgacttcctgtttgagaggagactccaaagtttcattttc
gatatactgatgcaacattcaagaggaaagtctgcacttgttttctgttctactagaaaa
ggcgcacaagaagcagcacagtgcctttcacaaactgcgagttctctaggctattcaaat
ccatttatgaaatcgatgcagcagtatgaacatctaaaggaggctgcactaacctgtagc
gacaagcagttgcaggcttgtctcgtacatggagttggttatcacaacggtggtctttgc
ctaaaggataggagtgtcgttgagggacttttcctgaagggtgatattcaaattctttgc
acgacgaatactttggcacatgggatcaacttacctgctcacacagtggtgataaagtca
acacaatttttcaacaaagagaagggtctgtatgtagaatatgagagatccatggttctt
cagatgtgtggaagggctgggcgtccaccatttgatgatactggaacaattataatcatg
acaagaagagagacagtgcatctatatgagaaccttctaaatggatgtgagatggtggag
tctcagttacttccatgtgcggttgagcatctaaatgcagagattgttcagctgacggtg
tctgatataactttggctattgagtggctcaagtgctcgtatttgtacatcaggataaag
aagaatcctcagcattacggaattaagaaagaaattccatgtgaacttcttgaaaagcaa
atgaaagatatatgtgttgagaagatccatgagctgggggagtatggtctaatttggaca
gatgaagatggtttccttctaaaaccattagaacctgggaggctgatgacaaaattctat
ctgaaatttgatactatgaagcttattgtcaaagcttctgcctgttgcactttggaagat
ctgttgcatatcatctgccactctgcagagataacttggatccaactacgacgaaatgag
aagaagctccttaatgagataaatgctgacaaagagggaaggctttggttccatgttgtt
ggtgcaaatgggaaaaggaagaagcgtattcaaacaagagaagaaaaaatatttattctg
gcaaatgattgtttaactggggaccctctagtccatgatctatctcttaaccaggaaatg
aattcaatatgctcaaatggatgcagggttgccaaatgcatgagagaatattttatatac
aaaaagaattacaagtctgccataagttctatgctccttgcgaaatgcttacaccaaaaa
ctttgggagagtagtccatttttgctgaagcaattgcctggaattggaattgtcacagca
aaggcactgaagactgctggaattgattcttttgagagtttggcaactgctgatgctagg
aagatagaatccgtaacaggacgaaattatccatttggagatagcataaaaagttatttg
ccatcattaggccccaaaattgatataaacatagaggatgctggaaacagacagggaaaa
tcaacaattattgtaacactgactcgcctatcacaggcagtaggatccagtaaacaaaat
tacgctgatatggttgtgggatcagaggaagataatgcgatcctctttcatgagaaaata
aagactcaagaattttccagtccatactctgtcaaactgtatgtcccatgccccccaaat
gccagggctactctgaaggttgacgtcatttttgaagaatatgttggtcttgatatccac
aagaagcatgtggtcagcagggaagattttcatgtgaccaaagtgtttgggattaaaaag
gcagaacccttgtacaatctgcctgcagagagctgtttggttagctctaaaacaactcgg
acaaatcaatctaagtatcataatggacagaacccactttctaaagaggtatgtgttata
gaagatgattttagggccaaagctccagacaaagctgataatgatctggaaattctggga
acaagagagtacaacaacttagcttcactggaggccccaagctttactctactgcatgaa
gaagattatgaagatgttccagatgtattggcttctgaaccagtagaggcagaatgcaaa
agtgccaccaacaacacaatttttgatcacatacgcaagaaatccagagatttccccaat
ctaatgttgtcgaaatccatggatagttcttatgaacctttgatactgaagaaaatgaag
acatcgggcgatcagtttggactagatcagagcagtctgcatgcatatgaagtcacgcct
atggtctttgatcgtactgaggctagagtctctccaaccaatacagatgagaggtgccgc
aacatcctgaccagaactgcagaaactagatcctttcagtttacgggcaaaatggacagt
atatctcagaagagcgagatcctgaacagaactcaaggcaaaaactctactcaacttgcg
ggtaaaaaagcatttgaaaagagcaagaccccagatgagaattcacttcactttgtaggt
aaaagggacagctcgtctgagaaaagcaaggctctaagcaagactccagatgagaattct
cttcagtttttaggtaaaatggacaactcatctgagaagagcaaattctgcttcagcagt
cctcttgcagatttccagcctatgcaatgtacaaagcaagttgcagcctcagtccaacct
ctcacgattcaggattattgcaaggatattttggcgagtgcaaagagcagtgggactggc
gcatcttttcttgacgttaagagtgtcttctcatttctctga
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