Oryza glaberrima (African rice): 127763244
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Entry
127763244 CDS
T08853
Name
(RefSeq) putative adagio-like protein 2
KO
K12115
clock-associated PAS protein ZTL
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127763244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127763244
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127763244
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_6
Kelch_1
PAS_9
F-box-like
NANM
PAS
PAS_3
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
127763244
NCBI-ProteinID:
XP_052143849
UniProt:
I1NXA9
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Position
2:2660026..2664485
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AA seq
618 aa
AA seq
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MEWDSDSEGSGDEEEEEEGVEVGGGGDGGVGVGVGGGFALAIEGVLGACGLVVSDALEPD
FPIIYVNRGFEDATGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDTTVVTDIRRCLEEGTV
FQGDLLNFRKDGSPFMAKLQLTPIYGDDETITHYMGMQFFNDSNVDLGPLSVSTTKEIVR
STLITPDNTIRPSPMGKGFCSEHSDLFLLSDEVLCQKILSRLSPRDIASVNSVCKRLYHL
TRNDDLWRMVCQNAWGSEATQVLETVAGTRSLAWGRLARELTTLEAVTWRKLTVGGAVEP
SRCNFSACAAGNRVVLFGGEGVNMQPMNDTFVLDLNASKPEWRHINVRSAPPGRWGHTLS
CLNGSRLVLFGGCGRQGLLNDVFMLDLDAQQPTWREIPGLAPPVPRSWHSSCTLDGTKLV
VSGGCADSGVLLSDTYLLDVTMERPVWREIPASWTPPCRLGHSLSVYDGRKILMFGGLAK
SGPLRLRSNDVFTLDLSENKPCWRCITGSGMPGASNPAGVGPPPRLDHVAVSLPGGRILI
FGGSVAGLHSASKLYLLDPTEEKPTWRILNVPGRPPRFAWGHSTCVVGGTKAIVLGGQTG
EEWTLTELHELSLVSSLV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggacagcgactcggaggggagcggagacgaggaggaggaggaggagggggtt
gaggtggggggaggtggggatgggggcgtgggcgtgggagtcggaggggggttcgcgctg
gcgatcgagggggtgctgggcgcgtgcgggctggtggtgtcggacgcgctggaaccggat
ttccccatcatctacgtcaaccgcggcttcgaggacgccaccgggtaccgcgccgaggag
gtgctcgggaggaactgtcgattcttgcagtgtagaggaccatttgctaagaggagacat
ccccttgttgatactacagtagttactgacattcggagatgcttagaggaaggcactgtg
ttccagggcgatctgctgaactttaggaaagatggttctccattcatggcaaagctccag
ttaacacccatttatggagatgacgaaacaataacccactatatgggcatgcagttcttc
aatgactctaatgttgatttggggccattgtctgtctctacaacaaaggagattgtgaga
tctactttgattacaccagataacaccatccgaccaagtccaatggggaagggcttctgc
tcagagcattctgatcttttcctattgagtgatgaggtactttgccagaagatcctatca
agattatcgcccagggatatagcatctgtaaactctgtatgtaaacggctgtaccactta
acaaggaatgacgacctttggagaatggtttgtcagaatgcatggggcagtgaagcaact
caagttcttgagactgtggctggaacaagaagtttggcatgggggcggttagcaagagag
ttgaccaccctggaagctgtcacctggaggaaattgacggttgggggtgcagtggagcct
tctcgctgcaacttcagcgcttgtgcggcagggaaccgtgttgtcctttttggaggggaa
ggtgttaacatgcagccaatgaatgatacatttgtgcttgatttgaatgccagcaagccg
gaatggaggcatatcaatgtgagatcagctcctcctgggcgctggggtcataccctttct
tgcctaaatggatcacggttggttttgtttggtggttgtggaaggcagggcctgctcaat
gatgtgtttatgttggatttggatgcacagcaaccaacttggcgtgagattcctggcctt
gcaccaccagttccacggtcatggcatagttcttgcacattggatggaacaaaattggtg
gtatctggtggctgtgctgattctggtgtgcttctcagtgacacgtatcttttggatgta
acaatggaaagacctgtttggagggagatacctgcatcttggactccaccttgtagattg
gggcactcgctctctgtctacgatggcaggaaaatcctgatgtttggtggtcttgctaaa
agcggtcctctacgactaaggtctaatgatgtattcacattggatttaagtgaaaataag
ccatgctggcggtgtatcaccggcagtggaatgccaggagccagtaatccagctggagtt
ggtccaccccctcgccttgatcatgtcgctgtgagccttcctggaggtagaattttgata
tttggtggatcagtggcaggtcttcactccgcttcaaagctttacctgctggatccgact
gaagagaagcctacctggaggatactgaatgttcctggccgccctccgcgatttgcctgg
ggccacagtacctgtgtggtaggaggtacaaaggcgatagttcttggaggacaaactgga
gaggagtggacattaactgaactgcatgagctttctctggtaagctctttagtctga
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