Oryza glaberrima (African rice): 127763253
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Entry
127763253 CDS
T08853
Name
(RefSeq) ATP-dependent RNA helicase DRS1-like
KO
K03257
translation initiation factor 4A
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127763253
03012 Translation factors [BR:
ogl03012
]
127763253
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127763253
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127763253
mRNA cycle factors
Stress granule specific factors
127763253
Translation factors [BR:
ogl03012
]
Eukaryotic type
Initiation factors
eIF-4
127763253
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127763253
Exosomal proteins of bladder cancer cells
127763253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4283
ResIII
Motif
Other DBs
NCBI-GeneID:
127763253
NCBI-ProteinID:
XP_052143863
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All DBs
Position
2:6675406..6680069
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AA seq
888 aa
AA seq
DB search
MAQQEHNMVTKGTERLVAGAQLFGHSTRQPFYMIQPSEEVVQKEKFYHHCLLITSDVSNL
DLRKVKVEVSKFWKLTDWEIRTEGRHNFLVSLNSEDDLVSCLKTPRIETSIDDKEVNFTV
ARWKEDDDENIELIREWILVYGVPRIYRNWKELYQIASAVGVLIDVDEESLEGDHKEPIK
LKVALRGVDAAPFSCHFVFGWYSRCVTFTIEDKAQTTECEREVLEDCNGEDHLDEFGKEY
NNKTDKLIEMPPEILNKGMNLESSSHDTSIVVSTHNHTSDVKGCSDKELEAIESAVLVEE
PSSIEDNNISAPAPTTTIISEKTAEDSPWAEREQSISGSSTSMIGDTLFKATVIHSKKTT
EDIPKAEGGQSTSGNSTSIIGEEPFRGIQKPPVKIVYARRNKRSMEKQDYKSFLEKQHQK
EMEAAIVGQRQKSDDESGGDGNNKDSNSIAPSAIAINSKKKQTTKDIVTTQGAQSISESS
IGETQTKGTGGARFNANQHVSKMSKQEHNEIFKSFNEMGLQESLLKGIYAYDLDKPSAVH
QRGIVPLCNGLDIIQQSLFGTTVTLCCGILQRLDYASTECQALVLVPTRDLAHETKNVIG
VLGQFLSAKAHAFCGGTSAHEDQQILSTGVQVAVGTPYHVLGMLQGRALCPDHIRMFVLD
EADEVLRGFKDQIHGIIQFLPNKTQFGFFSASMSHEALDMCRKYMNKPVEIIVPRDEELE
GINVKQFYVNVEKEDCKLDKLCGLFNTMEITRSIIFVNTRHQAKSLTEKIRGKGYTVSAI
HGGIHQRARDKAVQEFQSGSSRILITTDLRGIDVLRAPAAIFYDLPTQPVCYLRHVQRSG
QHGRKGVAISFITNTDERVFSTIQKFCNIQIEELPSNVADLLREEFTQ
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaagagcacaacatggtcacaaaaggcactgaaagactggttgctggcgca
caactatttggccattctacaaggcaaccattctacatgattcaaccttcggaagaagtt
gttcagaaggagaaattctatcatcactgcctactgatcacatctgatgtcagtaacctg
gacctgagaaaagtgaaagttgaagtaagcaagttttggaagctgactgactgggagata
aggacagaaggcagacataatttcctagtgtccttgaactcagaggatgacctagtaagc
tgtttaaagactccaagaatagaaacatcaatagatgataaggaggtgaactttactgta
gcaagatggaaggaagatgatgatgaaaacattgaattgattagagaatggattttagtt
tatggggtcccaaggatatacagaaactggaaggagctatatcaaattgcatcagcagtc
ggggtattgattgatgtggatgaggaaagtttggaaggtgaccataaggagcctattaag
ttaaaggttgcattgagaggtgtcgatgctgctcctttctcatgtcactttgtgttcggg
tggtattcaagatgtgttacattcacaatagaagataaagcacaaaccacagagtgtgaa
agggaggtcttggaagattgcaatggtgaagatcatcttgatgaatttggtaaggaatac
aacaacaagacagacaaacttattgaaatgcctccagaaatactgaataaagggatgaat
ttggagagcagtagtcatgacactagtattgttgtttcaactcacaaccatacatcggat
gtcaaaggctgctcagacaaggaattagaggcaatagaatcagctgtattagtggaagag
cctagctccattgaggataacaacataagtgctccagcacccactacaaccatcatctct
gaaaagacagcagaagacagtccctgggctgaaagggagcagtccataagtggaagttca
actagcatgattggagacacgctcttcaaagccactgtgatccactccaagaaaacaact
gaagacataccaaaagctgaaggggggcaatccacaagtggaaattcaacaagcataatt
ggagaagaacccttcagaggtatacaaaaaccacctgtcaagattgtgtatgcaagaaga
aataaaagatccatggagaagcaggattacaaaagcttcctagaaaaacaacatcagaag
gaaatggaagcagctatagtgggccaaaggcagaagtcggatgatgagtctggaggagat
ggaaacaataaagacagcaattcgattgctccatctgccattgcgatcaactctaagaag
aagcaaacaacaaaagacattgtgacaactcaaggagcacaatctatcagtgagagttca
attggagaaactcagacaaaaggaaccggaggagctcggtttaatgcaaatcaacacgtt
tctaaaatgagcaaacaggaacacaatgaaatctttaagagtttcaatgagatgggtctc
caagaaagcctactgaagggaatatatgcatatgatctggataagccttctgcagtccat
caaagaggaattgtccctctatgcaatggtctggacattatccagcagtcactgtttgga
acaactgtgaccttgtgctgtggtattctgcaacgactagattatgcatctacagaatgc
caggctttggttcttgtaccaacacgagacttagcacatgagactaaaaatgttattgga
gtacttggtcaattcctaagtgctaaagctcatgctttttgtggagggactagtgcccat
gaggaccagcaaattctgtctactggagttcaggttgctgttggcaccccttatcacgtt
cttggcatgctgcaaggtagagcactctgtccagatcacattagaatgtttgtcttggat
gaagcggatgaagtactgagaggtttcaaggaccagatccatggtattatccagtttctt
ccaaacaaaacccagtttgggttcttctctgctagtatgtcccatgaagctcttgacatg
tgccgcaagtacatgaataagcctgtggaaatcattgtgccaagagatgaagaacttgag
ggtatcaatgtcaagcagttctatgttaacgttgagaaggaagactgtaagctggacaaa
ttgtgtggtcttttcaacacaatggaaatcacacggagcatcatttttgtcaacactcgg
catcaggccaagtcattgacagaaaagattagaggcaaggggtacactgtctcagcaatt
catggaggcatacaccaaagagccagagacaaagctgttcaggagttccagtctggatca
tcccgtatcctcatcaccactgatctccgtggcatcgatgttctgcgtgcccctgctgcc
atcttctacgatctgccgacgcaaccagtctgctacctccgtcatgttcaaagaagtggg
cagcatggacggaagggtgtggccatcagcttcataactaacactgatgagcgtgtgttc
tctaccatccagaagttctgcaacatccaaatagaggagctaccctccaacgttgccgat
ctccttcgagaagagtttacccaatag
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