Oryza glaberrima (African rice): 127763321
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Entry
127763321 CDS
T08853
Name
(RefSeq) SNW/SKI-interacting protein A
KO
K06063
SNW domain-containing protein 1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127763321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127763321
Spliceosome [BR:
ogl03041
]
Complex B
Other components
Prp19-related factors
127763321
Complex C
127763321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
PRCH
Motif
Other DBs
NCBI-GeneID:
127763321
NCBI-ProteinID:
XP_052143944
UniProt:
I1P4H1
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Position
2:complement(30803649..30805985)
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AA seq
607 aa
AA seq
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MASLKELLPTPKAAASTFYDHSSDPWFKERYGGESAQSDAAAAAAKPSGPAKPVPPYGKR
GGFVPRRPEDFGDGGAFPEIHVAQYPLGMGRRDEKGGSKILALTVDAKGSVAFDAVVKQG
ENASKIVYSKHSDLVPKIATADSEATADDEEYQKQIEETTERTKAALEKVVNVRLSAAQP
KNVPTHDSESKFIKYKPSQQSAAFNSGAKERIIRMSEMAQDPLEPPKFKHKRVPRASGSP
PVPVMHSPPRPVTVKDQQDWKIPPCISNWKNPKGYTIPLDKRLAADGRGLQEVQINDNFA
KLSEALYVAEQKAREAVQMRSKVQRELQLKEKERKEQELRALAQKARMERTGAPPAPTGV
PAGGGRGAVDDREEDMDLEQPREQRRESREEREARIERDRIREERRRERERERRLEARDA
AMGKKSKLTRDRDRDVSEKIALGMASTGGAKGGEVMYDQRLFNQDKGMDSGFATDDQYNI
YSKGLFTAQPTLSTLYRPKKDGDSDVYGDADEQLEKVMKTDRFKPDKGFSGASERSGKRD
RPVEFDKQEENDPFGLDQFLTEVKKGKKAVEKIGSGGAMRASGGSSMRDDFEGGGSGRSR
INFERGR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctcaaggagctcctcccgacgcccaaggcggcggcgtcgacgttctacgac
cacagcagcgacccgtggttcaaggagcggtatggcggggagtcggcgcaatccgacgcg
gcggcggcggcggcgaagccttcgggccccgccaagcccgtgccgccgtacgggaagcgt
ggcgggttcgtgccgcggcggccggaggacttcggcgacggcggcgccttcccggagatc
cacgtcgcgcagtacccgctcggcatgggccggcgcgacgagaagggcggctcgaagatc
ctcgcgctcaccgtcgacgccaagggcagcgtcgccttcgacgccgtcgtgaagcagggt
gagaacgcctctaagatcgtttactcaaagcacagcgacctcgtgcccaagattgccacg
gctgattccgaggcaaccgcggacgacgaggagtaccagaaacagatcgaagaaaccact
gaacgaactaaagctgccttggagaaggttgtcaatgttcggctctccgccgcacagccc
aagaatgtgccgacgcatgattcagagtcaaagtttatcaagtataagccatcgcagcaa
tcggcagccttcaattcaggtgccaaggagaggattattaggatgtcagagatggctcag
gatcctcttgagccaccgaaattcaagcataagcgagtgccccgcgcttctggatcaccg
cctgtcccagtgatgcactcgccaccacggccagtgacagtgaaggaccagcaagattgg
aagattccaccatgcatttcaaattggaaaaatccaaagggttacaccataccactcgac
aagaggttggcagctgatggaagggggctgcaggaggttcaaattaatgataactttgca
aagctctctgaagcactgtatgtggcggagcagaaggccagggaggcagtacagatgcga
tccaaggtgcagagggagctgcagctgaaggagaaggagaggaaggagcaagagctaagg
gcacttgcacagaaggcgcgcatggagaggactggtgccccacctgcacctacaggggtt
cctgctggtggtggtagaggtgctgttgatgacagggaggaagatatggatttggagcag
cctcgtgagcaacgaagggagagtagagaagaaagggaagcaaggattgagcgtgacagg
attcgtgaggagaggagacgtgagagggagagagagaggaggctggaggccagggatgcc
gcaatgggcaagaagagtaagctcactagagacagggatcgtgatgtcagtgagaagatt
gccctgggcatggcaagcactggcggtgctaaaggtggggaagtcatgtatgaccagagg
ttgttcaaccaggataaaggaatggactctgggtttgctacagatgatcagtataacatc
tactccaagggtctcttcacagcgcagccaacgctatccacactttacaggcctaagaag
gacggtgattctgatgtgtatggcgatgcagatgaacaactggagaaggttatgaagaca
gataggttcaaaccagacaaaggattttctggtgcttcagagaggtctggaaagagagac
agacctgtggagtttgataaacaggaggagaatgatcccttcggtcttgatcagttcttg
actgaagtgaagaaggggaagaaagctgttgagaagattggaagcggaggagccatgagg
gcaagtggtggatcctcaatgagagatgatttcgagggtggaggatctgggaggtcccgc
attaactttgaaagaggtcgttga
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