Oryza glaberrima (African rice): 127763365
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Entry
127763365 CDS
T08853
Name
(RefSeq) eukaryotic translation initiation factor 4B1-like
KO
K03258
translation initiation factor 4B
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127763365
03012 Translation factors [BR:
ogl03012
]
127763365
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
127763365
mRNA cycle factors
Stress granule specific factors
127763365
Translation factors [BR:
ogl03012
]
Eukaryotic type
Initiation factors
eIF-4
127763365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF-4B
Motif
Other DBs
NCBI-GeneID:
127763365
NCBI-ProteinID:
XP_052143999
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All DBs
Position
2:22712085..22716319
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AA seq
520 aa
AA seq
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MSNAWGGLGGAGAWALDAERAEEEERESAAAPAPSAGFPSLREAAAGAAAGKSKKKKGTT
LSLSEFTTYGAAAGRRPAAAAAAEPKGLTPQEMMMLPTGPRERSAEELDRSRLGGGFRSY
GSGDRRGGFDDDGRRGGPGRDADLDMPSRADESGNWSLNKKSFTPSPADSGARSRYGSLG
GGGGGAPAASSFGRADDDGDWSRGKKPMPMPSRYPSLGSGGGGGGFRDSPTSTDSDRWSR
AAPLPPHNGERERPRLVLDPPKRDASATPTPPPAEAARSRPSPFGAARPREDILAEKGLD
WRKMETEIDHKTSRPTSSQSSRPGSAHSSRPGSPGSQTSAVGSEGAPRARPKVNPFGDAK
PREVVLQEKGKDWRKIDLELEHRRIDRTETNEEKDLKEQINLLRVDLKETEANISDEDKK
GLSEKLSQMERELERLTVELDNKVRFGQRPGSGSGKVTAHLSNSPDESQITESTEQPRSR
SSIDQNPKPAEERWGFQGNRDRGSFGGNRNTDRSLTGQRW
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcctggggcggcctcggcggcgccggcgcgtgggcgctggacgccgagcgc
gccgaggaggaggagcgggagagcgccgccgcacccgccccgtccgcggggttccccagc
ctccgcgaggccgccgcgggcgcggccgccggcaagtcgaagaagaagaaggggaccacc
ctctcgctctccgagttcaccacctacggcgccgccgccgggaggcggcccgcagccgcc
gcggccgcggagcccaaggggcttacgccgcaggagatgatgatgctgcccaccgggccg
agggagcggtccgcggaggagctcgatcggtcccgcctcggcggtgggttccgctcctac
ggctccggggaccgccgcggcgggttcgacgacgacggccgccgcggcggccccgggagg
gacgcggatctcgacatgccgtcgcgcgccgacgagtcgggcaactggtcgctcaacaag
aagtcgttcacgccgtcgcccgccgactcgggcgcccggagcaggtacggatccctcggg
ggcggcggcggcggcgcccccgccgcttcctccttcggacgcgccgacgacgacggcgac
tggtcgcgcgggaagaagccgatgccaatgccgtcccgctacccgagcctcggctccggt
ggcggtggcggtggcttccgcgactcgcctacctcgaccgactccgaccgatggtcccgt
gccgctcctctgcctccgcacaatggcgagcgtgagcggccacgcctcgtgcttgatccg
cccaagcgggatgcctcggctacccctacgccgcctcctgccgaggcggcacgcagccgg
ccaagcccatttggcgccgcgaggccccgcgaggacattcttgctgaaaaggggctggac
tggaggaagatggagacagagattgatcataaaactagccgcccaaccagctcacagtct
agtaggccaggaagtgcgcattcatcacgtcctgggagccctggatcacagacatcagct
gtgggtagtgaaggtgcgccgagggctcggccgaaggttaatccttttggggatgcgaag
ccaagagaggtagttcttcaggagaaaggcaaggactggagaaagattgatcttgagttg
gagcatcgtcgaattgatagaacggagacaaacgaagagaaggatttgaaagaacagatt
aacctgcttagggtggatttgaaagaaactgaagcaaacataagtgacgaggataaaaaa
ggtttatcagaaaagttatcccagatggaaagggaactggagcgtcttacagttgagttg
gacaacaaggttcgatttgggcaaagacctggttctggatctggcaaggttactgcacat
ttaagtaattcaccagacgaatcacagattacagagtcaacggaacaaccacgttcccgt
agcagcatagaccaaaatcctaaaccagcagaagaaaggtgggggtttcagggcaacagg
gacagaggctcatttggtggtaacagaaatacagacaggtcgttaacagggcagagatgg
tga
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