Oryza glaberrima (African rice): 127763447
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Entry
127763447 CDS
T08853
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127763447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127763447
04147 Exosome [BR:
ogl04147
]
127763447
04090 CD molecules [BR:
ogl04090
]
127763447
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127763447
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127763447
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127763447
CD molecules [BR:
ogl04090
]
Proteins
127763447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_22
ABC_ATPase
Zeta_toxin
AAA_21
RsgA_GTPase
AAA_15
AAA_30
AAA_28
Motif
Other DBs
NCBI-GeneID:
127763447
NCBI-ProteinID:
XP_052144110
LinkDB
All DBs
Position
2:complement(4729169..4736881)
Genome browser
AA seq
1243 aa
AA seq
DB search
MGGDDRSAGKAKPVLGSFMTVFMHADAVDVVLMVLGLLGAVGDGLSMPVLLLITGSVYNN
FGGGAANVQEFSSKVNMNARNLLFLAAGQWVMTFLEGYCWTRTAERQASRMRARYLQAVL
RQDVEYFDLKKGSTAEVITSVSNDSLVVQDVLSEKVPNFVMNAAMFVGNYAFGFALMRQL
MLVALPSVVLLIIPTFMYGRVVVDLARRIREQYTRPGAIAEQAMSSVRTVYSFVAERTTM
AQFSAALEESVRLGLKQGLAKGVAIGSNGITFAILAFNVWYGSRLVMSHGYKGGTIFVVS
YAVIQGGLALGSGLSNVKYLSEASSAAERILEVIRRVPKIDSESDTGEELGNVAGEVEFR
NVKFCYPSRPESPIFVSFSLRVPAGRTVALVGGSGSGKSTVIALLERFYDPSAGEVMVDG
VDIRRLRLKWLRAQMGLVSQEPALFATSIRENILFGKEDATAEEVIAAAKAANAHSFISQ
LPQGYDTQVGERGVQMSGGQKQRIAIARAILKSPKILLLDEATSALDTESESVVQEALDL
ASMGRTTIVIAHRLSTIRNADIIAVMQSGEVKELGSHDELIANENGLYSSLVHLQQTRDS
NEIDEIGVIGSTSALGQSSSHSMSRRFSAASRSSSVRSLGDARDADNTEKPKLPVPSFGR
LLMLNAPEWKQALMGSFGAVVFGGIQPAFAYAMGSMISVYFLTDHAEIKDKTRTYALIFV
GLAVLSFLINIGQHYNFGAMGEYLTKRIREQMLAKILTFEIGWFDRDENSSGAICSQLAK
DANVVRSLVGDRMALVIQTISAVLIACTMGLVIAWRLALVMIAVQPLIIVCFYARRVLLK
SMSKKSIHAQAESSKLAAEAVSNLRTITAFSSQERILRLFDQSQDGPRKESIRQSWFAGL
GLGTAMSLMACSWTIGFWYSGRLMAEHQITAKEIFQTFIILASTGRVIAEAGSMTTDLAK
GADAVASVFAVLDRETEIDPDNPQGYKPEKLKGEVDIRRVDFAYPSRPDVIIFKGFTLSI
QPGKSTALVGQSGSGKSTIIGLIERFYDPIRGSVKIDGRDIKAYNLRALRRHIGLVSQEP
TLFAGTIRENIVYGTETASEAEIEDAARSANAHDFISNLKDGYGTWCGERGVQLSGGQKQ
RIAIARAILKNPAILLLDEATSALDSQSEKVVQEALDRVMIDRTSVVVAHRLSTIQNCDL
ITVLEKGIVVEKGTHASLMAKGPSGTYFSLVSMKQRGNQQVQQ
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcgacgatcgcagcgccgggaaggcgaagccagtgctcggatcgttcatgacg
gtgttcatgcacgcggacgcggtggacgtggtgttgatggtgcttgggctcctgggcgcc
gtgggcgacggactctcgatgccggtgttgctgctcatcaccggcagcgtgtacaataac
ttcggcggcggcgccgccaacgtccaggagttcagctccaaggttaacatgaacgcgagg
aacctcctcttcttggccgccggtcagtgggtcatgacgtttctagaggggtattgctgg
acacggacggcggagcggcaggcgtcgcggatgcgggcacggtaccttcaggcggtgctc
cggcaagacgtggagtacttcgacctgaagaaggggtcgacggcggaggtgatcaccagc
gtgtccaacgacagcctcgtggtgcaggacgtgctgagcgagaaggtgcccaacttcgtc
atgaacgccgccatgttcgtcggtaactacgcattcgggttcgcgctgatgaggcagctc
atgctagtggcgctgccgtcggtggtgcttctcatcatcccgacattcatgtacggccgc
gtcgtcgtcgacctcgctcgccggatcagggagcagtacacccgccccggcgccatcgcc
gagcaggccatgtcgtcggtgcgcacggtgtactcgtttgtggcggagcggacgaccatg
gctcagttctcagcggcactcgaggagtcggtgcgactggggctcaagcaagggcttgcc
aagggcgtcgccatcggtagcaacggcatcaccttcgccatcttggccttcaacgtctgg
tacggaagccgcctcgtcatgtcccatggctacaagggtggcaccatcttcgtcgtctcc
tacgccgttatccagggcggcctagcgcttgggtcagggttgtcgaacgtgaagtacctc
tcggaggcgagctcggcggcggagaggatcctggaggtgatccggcgggtgcccaagatc
gactccgagagcgacaccggcgaggagctgggcaacgtcgccggcgaggtggagttccgg
aacgtgaagttctgctacccgtcacggccggagagccccatcttcgtcagcttcagcctc
cgcgtgccggccgggcgcaccgtggcgctggtcggtggcagcgggtccggcaagtcgacg
gtgatcgcgctgctggagcggttctacgacccgtcggccggcgaggtgatggtcgacggc
gtggacatccggaggctccggctaaagtggctgcgagcgcagatggggctggtgagccag
gagccggcgctgttcgccaccagcatccgggagaacatcctgttcgggaaggaggacgcc
acagcggaggaggtgatcgccgccgccaaggcggccaacgcacacagcttcatctcccag
ctgcctcagggctacgacacacaggtgggcgagcgtggtgtccaaatgtctggggggcag
aagcagagaattgctattgcgagagcaatcctgaagtcacccaagatcctcctccttgat
gaagccactagtgcattggacactgagtcagagagcgttgtacaggaggcccttgaccta
gcatctatggggcggactactattgtgattgcacatcgcctatccactatccgcaatgct
gacataattgctgtcatgcagtctggtgaggttaaggagctgggatcgcatgatgagctc
attgccaatgagaatggcctctattcatctcttgtgcaccttcaacagaccagagattca
aatgagattgatgagattggtgtaattggtagtacatccgctctagggcagtccagcagc
cacagcatgagcaggaggttctctgcagctagcaggtcaagctcagtaaggtcattgggc
gatgcaagagatgctgacaacactgagaagccaaagcttccagtgccatccttcggaagg
ctacttatgcttaatgcaccagagtggaagcaagcactaatggggagttttggtgcagtt
gtgtttggaggcatccagccagcatttgcatatgccatgggaagcatgatctcagtctac
ttcttgacagatcatgcggagatcaaggacaaaacaaggacctacgcactcattttcgta
ggtctagcagtgctctcatttttgataaatattggtcagcattacaactttggtgcaatg
ggggaatacctcaccaagagaataagggaacagatgcttgcaaagatcctcacctttgaa
attgggtggtttgaccgtgacgagaactccagtggtgccatatgctcacagctagctaag
gatgccaatgttgtgaggtctctcgtgggtgatcgaatggctctggtgatccagactatt
tcagcagtgcttattgcatgcaccatgggtttggtcattgcctggcgtttggcccttgtt
atgatagcagtgcagcctctgatcattgtttgcttttatgctcgccgtgtcttactcaag
agcatgtccaagaaatcaatacatgcacaagctgaaagtagcaagctagctgctgaggca
gtctccaatcttcgtacaattacagccttctcatcccaagagcgtatcttacgccttttt
gaccaatcacaagatggaccacgcaaggaaagtatccggcaatcatggtttgcagggctc
ggcctcggcaccgccatgagccttatggcatgctcatggaccattggcttttggtatagt
ggcaggcttatggctgagcaccaaattactgccaaggagatcttccaaaccttcattatt
ctagcaagcacaggtcgtgtaattgcagaggcaggaagcatgacaacagacctagctaag
ggtgcagatgcagttgcttcagtatttgctgttcttgaccgggaaacagaaattgatcct
gacaaccctcagggatacaagccagagaagctcaaaggcgaggtggacatcagaagagtc
gatttcgcatacccatcaaggccagatgttataatcttcaaagggttcacattgagcatc
caaccaggcaagtcaacagccctggttgggcaaagtggctctggcaagtcaaccatcatt
gggctcatagagaggttctacgacccaattagggggtcggtgaagatagatggaagggat
atcaaagcatataatcttcgagcgctgcggcggcacattggattggtcagccaagagcca
acactatttgcaggtacaatcagagaaaacattgtgtatggcacagaaacggctagtgag
gcggaaattgaggatgcagcaagatctgctaatgcacatgactttattagcaacctgaag
gatggatatggtacgtggtgtggtgagagaggagttcagctatcaggaggacagaaacag
cgcattgcaattgcccgtgccatactgaagaacccagctatcctgcttctggatgaggct
acaagtgcactagatagccagtccgagaaagtggtacaagaggcactagatcgagtgatg
attgacagaacaagtgtggtggtggcacacaggctgagcactatacaaaattgtgacctt
atcactgtgctcgaaaaagggatagttgtggagaagggcacacacgcatccctcatggcc
aaaggcccctctggaacatattttagcttggttagtatgaaacaaagaggcaaccagcag
gtccagcagtga
DBGET
integrated database retrieval system
