Oryza glaberrima (African rice): 127763697
Help
Entry
127763697 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127763697
KO
K20168
TBC1 domain family member 15
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127763697
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
127763697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
LytM_N
Motif
Other DBs
NCBI-GeneID:
127763697
NCBI-ProteinID:
XP_052144438
LinkDB
All DBs
Position
2:complement(28341929..28349810)
Genome browser
AA seq
677 aa
AA seq
DB search
MRREEASAAAAEAGTPRSPDLHDLSDDSDYAAAAAASSSHSAMRSDLVDQGSGETAKVDV
VYEKERVTIHPTQYGSGRISGKLRLYLQQGSLFLSWEPNEGVDSLSSNSATMEIEKYRNL
YTIKALPLSDVRFIRKHTPTFGFEYIIIVLSSGLAFPPFYFYNGGLRELFATLKKHVFII
RSDDDPNVFLVNDFQDPLQKSLSSLELPGVATVANAMSRQNSLSFTSSVDEAGHGSDAKH
GASSSMTEYVSKQKHRSNDPGRDLSIQVLEKFSLVTKFARDTTSSLFRENHSSGGHTYGR
QQQEYVLDNRANDKYKDQQITPDKDSLLSDSMESNKILAWGKPREQPLSVDEWRSFLDPE
GRVMDSKTLRKKVFYGGIDHVLRKEVWKFLLGYHEYDSTYAEREYLAVMKRTEYEAIKSQ
WKSISSTQAKRFTKFRERKGLIDKDVVRTDRSVPYYEGDDNQNVLVLRDILLTYSFYNFD
LGYCQGMSDFLAPILYVMEDESESFWCFAILMERLGANFNRDQNGMHAQLLALSKLVELL
DPQLHNYFRKNDCLNYFFCFRWVLIQFKREFSFDQIMLLWEVLWTHYWSEHFHLYLCVAI
LKRYRSRIIGEQMDFDTLLKFINELSGEINLDRAIQDAEALCDQAGPNGAACIPPGTPPS
MPIETDGGLYVQQDEVM
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgagaagaagcctccgccgccgccgccgaggctgggaccccgcgctcaccggac
ctccacgacctctccgacgactccgactacgccgccgccgccgccgcgtcctccagtcac
tcggcgatgcggagcgatctggtggatcaagggtcgggcgagacggcgaaggtggatgtg
gtgtacgagaaggagcgtgtgacgatccacccgacgcagtatggctccggccggatcagc
gggaagctgcgcctctacttgcagcagggctccctgttcctgagttgggagccaaatgag
ggagttgattctttatcaagcaattcagctaccatggaaatagaaaaatatagaaacctg
tacactataaaggccttgccattaagtgatgtacgcttcatccgtaagcacaccccgaca
tttggattcgagtacataatcattgttctctcatcaggattggcttttcctccattctat
ttctacaatggtgggcttcgtgaattgtttgcgacactaaagaagcatgtttttattatc
aggtcggacgatgatcctaatgtatttcttgtcaacgactttcaagatcctctacagaaa
agtttgtcatcactggagcttcctggtgttgccaccgtagcaaatgccatgtcacgacag
aactcactcagtttcactagttcagttgatgaagccggacatgggagtgatgccaaacat
ggggcatcttctagcatgactgaatatgtctcaaagcaaaagcacagatcgaatgatcct
ggtcgtgatctttctatccaagtactggagaaattttctctggttacaaagtttgcacga
gataccacgtcaagtctttttcgggaaaaccacagtagtggtggtcatacttatggaagg
cagcagcaagaatatgttttggacaacagagcaaatgataagtacaaagatcagcaaata
acaccagataaggattctttgctgtcagattcaatggagtctaataaaattctagcgtgg
ggaaaaccaagagaacaaccgttgagtgttgatgagtggagatccttcttagatcctgaa
ggtagagttatggattcgaagacgctgaggaaaaaggttttctatggagggattgaccat
gttctgagaaaagaggtctggaaattcctgttggggtatcatgaatacgattcaacatat
gccgagagggaatatcttgctgtcatgaaaagaacagaatatgaagccataaaatcccag
tggaagagtatttcgtccacacaagctaaaagatttaccaagtttagggaaagaaaaggc
cttatcgacaaagatgtggtgaggacagatagatcagttccatattatgaaggagatgac
aatcaaaatgttcttgtgctacgggatatcctgttgacgtattccttctataatttcgac
cttggctattgccaaggaatgagtgattttctggcacctatactttatgtgatggaggat
gagtctgagtcattttggtgctttgcaattttgatggaacgactaggagccaattttaac
cgtgatcagaatggcatgcatgctcagttacttgcattatccaagctcgtggagcttctt
gatcctcagttacataactattttcggaagaacgactgcttaaactactttttctgtttt
cgttgggttcttatacaattcaaaagggagttcagtttcgatcaaatcatgctgctgtgg
gaagttctgtggacacattattggtcagaacatttccacctctacttatgcgtcgcgatc
ctgaaaaggtaccggtcgcggataataggagagcagatggatttcgacacccttctcaag
ttcatcaatgagctcagtggcgagataaatcttgaccgggcaattcaggacgcagaggca
ttatgtgatcaggcaggccctaacggggctgcctgcattcctcctggaaccccgccttct
atgcccatcgagacggacggtggcctctacgtacaacaagacgaggtcatgtga
DBGET
integrated database retrieval system
