Oryza glaberrima (African rice): 127763805
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Entry
127763805 CDS
T08853
Name
(RefSeq) disease resistance protein RPP13-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ogl03021
]
127763805
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
127763805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
NB-ARC
LRR_14
Rx_N
WH_DRP
AAA_16
AAA_22
LRR_At5g56370
CREPT
CTK3
Motif
Other DBs
NCBI-GeneID:
127763805
NCBI-ProteinID:
XP_052144562
LinkDB
All DBs
Position
1:complement(37204521..37224986)
Genome browser
AA seq
1462 aa
AA seq
DB search
MAETAITTVLAKVAELVAWEAAVLLEVGDDVRLLRDKLEWLHTFIRDADRRRRRRDDEFV
AVWVRQTRDVAFEAEDALDDFLHRAARRHRQATPLAAMLLPSCAAAAAAWPPRCAGQVAL
RHGLSGRIRQIRKRLDEISANRAVYNIEHTPSPAWATHPSSAAATALAAWDDLEEYTVGF
DKYSNMLKEQLIDDAVTGRAIVSIVGESSIGKTTLGRKVYQSPEVRNHFEIRTWTVLPPK
CRPADVLRDIYRQASSQLRRSPSQQSADDGCGADAAVAACRSSGKDVGNLLFRNLTGRRY
IVVVDGSIAASDWNSLRASLPDEGNGSRVVLITDMAGLEVVTYAAGPTMNSPIKLERLSP
ENTYEVFRRRVFGRGGDCPRQHRSRYYQKIFQITRGLPLSIVVLAGVLRSKEPPAEWDEV
MSQLATAREPSSSSSKNGNSGRIMSLAFDDLPHHLKSCFLYFAAMRESATVDAQRLVRLW
VAEGFVRPRRGSTMEEVGQGYLKELISRCMVQLVDKDEFGVVQTVVVHDRLHAFAQDEAQ
EASFIESHDSTDVLAPATVRRLAVQNSSERYVHLSNALPKLRSVVCDLVDGRNGGGGGGK
CIQCTDLGFLHASKFLRVIDIHGLELKKLPNEIGSMIHIRYLGLQCGQLEKLPPSVSNLV
NLQSLILKGRNAGHVLDVTAAFWRITTLRHVVAPFALPKVLGDLHSLQTLHGVQHLCWDT
RGGGNPLGTSTNLRSLELSGLLAKHAAALTAALESLDLLVHLMLDGESLPSTVFTIPSLR
RLQSLKLRGSMDSPEGPGGDDDDDNESADVGVVRYIRPNLTRLSMWSTMVGQKFVDMLGE
LPSLAELTLMVAAFDGERLEFRDGGFRSLQKLKLGLPELEEWTVRAGAMASLARLTLFGC
LKMRMLPEALAGIPELEEVVLYRMPIMVERIKKHGGEDHHKVKHVPVIQTIWFLTSGIWG
ILNAQARLHNMNAGFSPQILAQKLLKLNNSRQSIETLSHWCVFHYRHCRQVVETWESDFH
SAPRERRVSLLYLANDIVQNSKKDSGRYVNEFWRVIPAALNDVFVNGDDFGRNVVQRLVD
IWEERNIFGSHGQSLKEDYSRRFKEFKSKSRNSSGELLEKVISCYKHMLNAHVDDDTLMR
KCQNALSFVDNLSNEYENNSILDCSNGSGFVEELQEQHNILRDSIEQFKTSELLRGNLIS
CLKEALHEQEFKMERARSQIKEVQSRYKKADDLCQKLGIHVERQEQPNHGPKNSGSEMHG
SFGPDSANASSFEKGQSSAVMYSQENGGEHEIPNGVFSSRATKDNIEQKLEEHSTNKRQK
LQNDVYVSRPQSPPPPLPSDAFEQPPPPPEHPPPPESTSPPPPPTSDPPPVPPPPPTTGS
FMPIPSAPFAGLPVPAGPMAAVPYNSYPVFPPMNYPMVNIPPPFPSAPNTPPGFQGLAGP
FYGPPYPAPPPPPPPPPPMNRK
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atggcggagacggcgatcacgacggtgctggcgaaggtggcggagctggtggcgtgggag
gcggcggtgctgcttgaggtcggggacgacgtccgcctcctccgcgacaagctggagtgg
ctccacaccttcatccgcgacgccgaccgccgccgccgccgccgcgacgacgagttcgtc
gccgtctgggtgcgccagacccgcgacgtcgccttcgaggccgaggacgcgctcgacgac
ttcctccaccgcgccgcccggaggcaccgccaggccaccccgctagcggcgatgctgctg
ccttcctgcgccgccgccgccgccgcgtggcccccgcgctgcgccggccaggtcgcgctc
cgccacggcctctccggccgcatccgccagatcaggaagcgcctcgacgagatctccgcc
aaccgcgccgtctacaacatcgagcacacgccgtcccccgcctgggctacccacccctcc
tccgccgccgccaccgccctcgccgcctgggatgatttggaagagtatactgtcggcttc
gacaagtacagcaacatgctcaaggagcagctcatcgacgacgccgtcaccggccgcgcc
atcgtctccatcgtcggcgagagcagcatcggcaagacgacgctcggccgcaaggtgtac
cagagccccgaggttcgcaaccacttcgagatacgcacgtggacggtgctcccgcccaag
tgccgcccggccgacgtcctccgtgacatctacaggcaggccagctcccagctccggcga
tctccgtcccagcagagcgcggacgacggttgcggcgccgacgccgctgtggcggcgtgc
cggtcgtcggggaaggacgtcggtaacctgctgttccggaacctgaccggccggcgttac
atcgtcgtcgtcgacggcagcatcgcggcctccgactggaacagcctgagagcgtcgctc
cccgacgagggcaacggcagcagggtggtgctgatcaccgacatggccgggctggaggtg
gtcacgtacgccgccgggccgacgatgaacagcccgatcaagctggaacggctcagcccg
gagaacacgtacgaggtgttccggcgccgggtgttcggccgcggcggcgactgcccgcgc
cagcacaggtcgaggtactaccagaagatcttccagatcacccgcggcctgccgctgtcg
attgtcgtcctcgccggcgtgctgcggtccaaggagcccccggcggagtgggacgaggtg
atgtcgcagcttgccacggcgagggagccgtcgtcgtcgtcgtccaagaacggcaacagc
gggcggatcatgtcgctggcgttcgacgacctgccgcaccacctcaagtcgtgcttcctc
tacttcgcggcgatgcgggagagcgccaccgtggacgcgcagcggctggtgcggctgtgg
gtggccgaagggttcgtgcggccgcggcgggggagcaccatggaggaggtcgggcagggc
tacctcaaggagctcatctcccggtgcatggtgcagctggtggacaaggacgagttcggc
gtcgtgcagacggtggtggtgcacgaccgcctccacgccttcgcgcaggacgaggcgcag
gaggccagcttcatcgagagccacgacagcaccgacgtgctcgcgccggccaccgtgcgc
cgcctcgccgtccagaactcctccgagagatacgtccacctcagcaatgctctccccaag
ctccgctccgtcgtctgcgacctcgtcgacggtcgcaacggcggcggcggcggcggcaag
tgcatccagtgcaccgaccttggcttcctccacgcgtccaagttcctccgtgtcattgac
atccatggcctcgagctcaagaagcttccaaacgaaatcggctcgatgatccacatcagg
tacctgggtctccagtgcggccagctggagaagctgccgccgagcgtgagcaacctcgtc
aacctgcagtcgctgatcctgaagggcaggaacgccggccacgtgctcgacgtgaccgcc
gcgttctggaggatcaccacgctgcggcacgtcgtggcgccgttcgcgctgcccaaggtg
ctcggtgacctgcacagcctccagacgcttcacggcgtgcagcatctgtgctgggacacg
cgcggcggcggcaacccgctggggacgtccaccaacctccggtcgctggagctcagcggg
ctgctcgccaagcacgccgccgcgctgacggcggcgctggagagcctggacctgctggtg
cacctgatgctggacggcgagtcgctgccgtcgaccgtgttcaccatcccgagcctacgg
cggcttcagagcctcaagctacggggctccatggactcgccggaggggccgggtggcgac
gacgacgacgacaacgagtcggcggacgtcggcgtggtgcggtacatccggccgaacctg
acacggctgtcgatgtggagcacgatggtggggcagaagttcgtggacatgctgggggag
ctcccgagcttggcggagctgacgctgatggtggcggcgttcgacggcgagcggctggag
ttccgggacggcgggttccggagcctacagaagctgaagctgggcctgccggaactggag
gagtggacggtgagggccggggccatggcgtcgctggcgaggctgacgctgttcgggtgc
ctcaagatgcggatgctgccggaggcgctcgccgggataccggagctggaggaggtggtg
ctgtacagaatgccgatcatggtggagaggatcaagaagcacggcggggaggatcaccac
aaggtcaagcacgtccccgtcatccagaccatctggtttcttacctctggaatttggggg
attctcaacgcccaagctagattacataacatgaatgcaggattcagcccacagatcttg
gcgcagaagcttttgaagctcaataattcacgacaaagtatagagactttgtcacattgg
tgtgtctttcattatcgacactgccgacaagttgttgaaacatgggaatctgattttcac
tcagctcctcgtgagaggagggtatctttgctgtaccttgcaaatgatatcgtgcagaac
agcaaaaaggactctggtagatatgtaaatgagttctggagggtcatccctgctgcctta
aacgatgtgtttgtcaacggcgatgattttggaaggaatgtcgtacagagactggttgac
atatgggaagaacgtaacatatttggatcccatgggcaaagtctcaaggaagactattct
agaaggttcaaggagttcaaatccaagtcgagaaattctagtggggagctgctggaaaag
gttatctcttgctacaagcatatgttgaatgctcatgtagacgacgatactctcatgcgg
aaatgtcaaaatgctcttagctttgttgacaatctcagcaacgaatatgagaacaactct
attttagactgtagtaatggatctggctttgtggaggagctgcaagaacaacataacatc
ctgagagactccattgaacaattcaaaacatcagaattactcagaggcaatcttatttct
tgcttaaaggaagcactccatgaacaggagttcaaaatggaacgggccagaagccagatt
aaggaagttcaatcccgatacaagaaagctgatgacctctgccagaagcttggaatacat
gtagaaaggcaggaacaaccgaaccatgggcctaagaactcaggttctgaaatgcatggt
agctttggcccagattcagctaatgccagttcttttgagaagggacaatcaagtgcggtg
atgtattcccaggagaacggcggtgagcatgagatccccaatggcgttttctcttcacgg
gccaccaaggataacattgagcagaaactagaagagcactctacgaataagagacagaaa
ctacagaatgatgtgtatgtttcacggcctcaatcgccacctccgccactgccatctgat
gcatttgaacagccgccgccaccacctgagcatcccccgccaccagagtctacatcgccc
cctccaccgccaacttctgatccacctccagtccccccgccaccaccgacaacaggttca
ttcatgccaattccttctgctccgtttgcgggactgccagtacctgccggccctatggca
gcagtaccctacaactcttacccagtatttcctcctatgaactatcccatggtcaacatc
ccacctcccttccctagtgctccaaataccccccctggtttccaaggtttggctggtccc
ttctatggccctccttaccctgcaccaccaccgccaccgccaccgccaccaccgatgaac
aggaaatag
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