KEGG   Oryza glaberrima (African rice): 127764011
Entry
127764011         CDS       T08853                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127764011
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogl03019]
    127764011
   03041 Spliceosome [BR:ogl03041]
    127764011
Messenger RNA biogenesis [BR:ogl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     127764011
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     127764011
Spliceosome [BR:ogl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    127764011
SSDB
Motif
Pfam: RRM_1 RRM_7 RBD_RDR6
Other DBs
NCBI-GeneID: 127764011
NCBI-ProteinID: XP_052144777
LinkDB
Position
2:23037991..23042913
AA seq 383 aa
MARKRNRGRTRRATQAEAEVEQSEREMVGDEAVEEEDDDVTKMNPPPATAGEREEEEEEG
IEGLLEPFTRNELLDLLVEACLRNPALRSRLAATAESDAAHRRLFVHGLGPGVTAAAMAA
AFAPFGALDECHAVADRATGRCRGYGFVTFRRRSAARRALAADASSRLAVGGRPVACQLA
SLGPTSPDRKLFVDNVPARAAHDELRRLFSRFGEIEAGPLGADRATGQFRGYAIFFYKYP
EGLTKALEERKVVFDGCELHCRRAHRVNKEKHLMTMPADAGAQSNGFENAASPIIHVQPK
ELALASTTQTPLGSNRPVEMMAKGPRSGTVPFRQNAGAGLLGACPVATVTPSTPDQSTPV
SHSGASISTPRTAQRLAKSGAQG
NT seq 1152 nt   +upstreamnt  +downstreamnt
atggctcggaagaggaatcgggggcggacgcggcgcgccacgcaggcggaggcggaagtg
gagcaatccgagcgagaaatggtaggggatgaagccgtggaggaggaggacgacgacgtc
acgaagatgaatccgccgccggcgacggccggtgagcgcgaggaggaggaggaggaagga
atcgaggggcttctggagccgttcaccaggaacgagctcctcgacctcctggtcgaggcc
tgcctccggaaccccgccctgcgctcccgcctcgccgccaccgcggagtccgacgccgcc
caccgccgcctcttcgtgcacggcctcggccccggcgtcaccgccgccgcgatggccgcc
gccttcgcccccttcggcgcgctcgacgagtgccacgccgtcgccgaccgcgccaccggc
cgctgccgcggctacggcttcgtcaccttccgccgccgctccgccgcgcgccgcgcgctc
gccgccgacgcctcctctaggctcgccgtgggcggccgccccgtcgcgtgccagctcgcg
tcgctcggccccacctcccccgaccgcaagctcttcgtggacaacgtgcccgcgcgcgcc
gcccacgacgagctgaggaggctcttctccaggttcggggagatcgaggcggggcctctc
ggcgccgaccgcgccaccggccagttccgcggctacgccatcttcttctacaagtacccc
gaggggcttacgaaggctctcgaggagcgcaaggtggtgttcgacgggtgcgagctccat
tgccggcgcgctcacagagtgaacaaggagaagcatctcatgaccatgcctgcagatgca
ggggcacagagcaatggcttcgagaacgctgcctcacccatcatccatgtccagccgaag
gagcttgcattggcatccaccacgcagacgcctcttggatcaaatcggccagttgagatg
atggcgaaggggcctagatcaggcacggttccctttcgtcagaacgctggagctggtctc
ttgggtgcatgccctgtggctacggtcacgccctctacgccagatcagagcacaccggtt
agccattctggagcttcaatttccacaccccggactgctcagagattggctaaatcagga
gcacaaggatga

DBGET integrated database retrieval system