Oryza glaberrima (African rice): 127764022
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Entry
127764022 CDS
T08853
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
127764022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127764022
03029 Mitochondrial biogenesis [BR:
ogl03029
]
127764022
Membrane trafficking [BR:
ogl04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127764022
Atg1 complex
127764022
Mitochondrial biogenesis [BR:
ogl03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127764022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
127764022
NCBI-ProteinID:
XP_052144787
UniProt:
I1P2K2
LinkDB
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Position
2:complement(25191900..25195743)
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AA seq
543 aa
AA seq
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MATLSDSAGGGGGGRAGAELMVPQFHLKALHAILAVRAPRPLAAAPAPAASFRRRDRWFH
LPLHAPPPPASAEHLPEPPPGEPLVVDVYLTPSGGGGGAEAVVERWTVSCEPWSAGARGG
GAAAASGEGLAVNRAYKRCITLLRSVYTALRLLPAYRVFRLLCASGQAYNYEMGFRVGSF
AAPFTRAEEAAMSTRRFAPVETQLGRLVVSVQYLPSLAAFNLEICSLAPAMLITDYVGSP
AADPMRAFPASLTEAASSAPAFPPRRPNSWAPSPAPWPYTPGQQAKFSPPPALYASPTPS
PPTFAGGYLQSRLSGETAPMIIPGGGRGPVHNRNMSDPVRGFMLPPPSPKNIRGDSGGHE
TPMETGRTGIRMADLYTNLPSVPKIKIKDSRDESGRFSGVFSSSGSPRLGFSRSSSRLSM
QDDTDDLDFPFAVDDVDTPDSRPGSSGGKDVGDQASSSSHKSQDAAVGYLVHMLKSARPL
RDSSNSPLTSRVESEGGNVSSFMSRRTSDALEELESFKEIKENLLARSRSRMQESLDKSL
RHS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctgtcggactccgcgggcggtggcggcggtggccgggcgggcgccgagctg
atggtgccgcagttccacctcaaggcgctgcacgccatcctcgccgtgcgcgcgccgcgg
ccgctcgcggccgcgcccgcgccggcggcgtcgttccggaggcgggacaggtggttccac
ctgccgctccacgcgccgccgccgccggcgtcggccgagcatctgccggagccgcccccc
ggggagccgctcgtggtggatgtctacctgaccccgtcgggcggcggtgggggagctgag
gcggtggtggagaggtggacggtgtcgtgcgagccgtggtcggccggggcgaggggcggc
ggcgccgccgccgcctccggggaggggctcgccgtgaaccgggcgtacaagcggtgcatc
acgctgctgaggtcggtgtacaccgcgctccgcctcctccccgcctaccgcgtcttccgc
ctgctgtgcgcatccggccaggcgtacaactacgagatgggcttccgcgtcggttccttc
gccgcgcccttcacccgcgccgaggaggcggccatgagcacccgccgcttcgcccccgtc
gagacccagctcggtcgcctcgtcgtctccgttcagtacctcccctccctcgccgccttc
aacctcgagatctgctccctcgcgcccgccatgctcataaccgattacgtcggaagcccg
gcagccgatcccatgcgtgccttcccggcgtcgctcacggaggccgccagctcggcgccg
gccttcccgccgcggcgcccgaacagctgggcgccgtcacctgctccctggccgtatacg
cccgggcagcaggcgaaattctcgccgccaccggcattgtacgcgtctcccacgccgtct
cctcccacgtttgcgggtggctacctgcaatcgcggctgagcggggagactgcgccgatg
atcataccgggtggtgggagaggccccgttcacaatcggaacatgtcggatcccgtcagg
gggttcatgctacctccaccttcaccgaagaacatcagaggcgactctggggggcatgag
acaccgatggagacaggccggacagggatccggatggctgatctctacactaatttgcct
tctgttcctaagattaagattaaggatagtagggatgaatctggcagattctcaggtgtt
ttttcctctagtggttccccacggcttgggttttcaagaagttcaagcagattgtcaatg
caggatgatactgatgatttagattttccttttgcggtggatgatgttgatacacctgat
tcccgaccagggagcagtggtggaaaggatgtgggggatcaagcgagctcatcatcccat
aaatcacaggatgctgctgtgggttatcttgtccacatgctgaagtctgcgcggccgctg
cgagactctagcaattcacctcttacatcaagggttgaatctgaaggaggtaatgtcagt
tctttcatgtcccgtaggacatctgatgcgctcgaggagcttgaatcttttaaagaaata
aaggagaacctgcttgcccgtagtagatcaaggatgcaagagtcattggataaatccttg
cgccattcttaa
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integrated database retrieval system