KEGG   Oryza glaberrima (African rice): 127764022
Entry
127764022         CDS       T08853                                 
Name
(RefSeq) autophagy-related protein 13a
  KO
K08331  autophagy-related protein 13
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    127764022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127764022
   03029 Mitochondrial biogenesis [BR:ogl03029]
    127764022
Membrane trafficking [BR:ogl04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    127764022
   Atg1 complex
    127764022
Mitochondrial biogenesis [BR:ogl03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    127764022
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-GeneID: 127764022
NCBI-ProteinID: XP_052144787
UniProt: I1P2K2
LinkDB
Position
2:complement(25191900..25195743)
AA seq 543 aa
MATLSDSAGGGGGGRAGAELMVPQFHLKALHAILAVRAPRPLAAAPAPAASFRRRDRWFH
LPLHAPPPPASAEHLPEPPPGEPLVVDVYLTPSGGGGGAEAVVERWTVSCEPWSAGARGG
GAAAASGEGLAVNRAYKRCITLLRSVYTALRLLPAYRVFRLLCASGQAYNYEMGFRVGSF
AAPFTRAEEAAMSTRRFAPVETQLGRLVVSVQYLPSLAAFNLEICSLAPAMLITDYVGSP
AADPMRAFPASLTEAASSAPAFPPRRPNSWAPSPAPWPYTPGQQAKFSPPPALYASPTPS
PPTFAGGYLQSRLSGETAPMIIPGGGRGPVHNRNMSDPVRGFMLPPPSPKNIRGDSGGHE
TPMETGRTGIRMADLYTNLPSVPKIKIKDSRDESGRFSGVFSSSGSPRLGFSRSSSRLSM
QDDTDDLDFPFAVDDVDTPDSRPGSSGGKDVGDQASSSSHKSQDAAVGYLVHMLKSARPL
RDSSNSPLTSRVESEGGNVSSFMSRRTSDALEELESFKEIKENLLARSRSRMQESLDKSL
RHS
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggcgaccctgtcggactccgcgggcggtggcggcggtggccgggcgggcgccgagctg
atggtgccgcagttccacctcaaggcgctgcacgccatcctcgccgtgcgcgcgccgcgg
ccgctcgcggccgcgcccgcgccggcggcgtcgttccggaggcgggacaggtggttccac
ctgccgctccacgcgccgccgccgccggcgtcggccgagcatctgccggagccgcccccc
ggggagccgctcgtggtggatgtctacctgaccccgtcgggcggcggtgggggagctgag
gcggtggtggagaggtggacggtgtcgtgcgagccgtggtcggccggggcgaggggcggc
ggcgccgccgccgcctccggggaggggctcgccgtgaaccgggcgtacaagcggtgcatc
acgctgctgaggtcggtgtacaccgcgctccgcctcctccccgcctaccgcgtcttccgc
ctgctgtgcgcatccggccaggcgtacaactacgagatgggcttccgcgtcggttccttc
gccgcgcccttcacccgcgccgaggaggcggccatgagcacccgccgcttcgcccccgtc
gagacccagctcggtcgcctcgtcgtctccgttcagtacctcccctccctcgccgccttc
aacctcgagatctgctccctcgcgcccgccatgctcataaccgattacgtcggaagcccg
gcagccgatcccatgcgtgccttcccggcgtcgctcacggaggccgccagctcggcgccg
gccttcccgccgcggcgcccgaacagctgggcgccgtcacctgctccctggccgtatacg
cccgggcagcaggcgaaattctcgccgccaccggcattgtacgcgtctcccacgccgtct
cctcccacgtttgcgggtggctacctgcaatcgcggctgagcggggagactgcgccgatg
atcataccgggtggtgggagaggccccgttcacaatcggaacatgtcggatcccgtcagg
gggttcatgctacctccaccttcaccgaagaacatcagaggcgactctggggggcatgag
acaccgatggagacaggccggacagggatccggatggctgatctctacactaatttgcct
tctgttcctaagattaagattaaggatagtagggatgaatctggcagattctcaggtgtt
ttttcctctagtggttccccacggcttgggttttcaagaagttcaagcagattgtcaatg
caggatgatactgatgatttagattttccttttgcggtggatgatgttgatacacctgat
tcccgaccagggagcagtggtggaaaggatgtgggggatcaagcgagctcatcatcccat
aaatcacaggatgctgctgtgggttatcttgtccacatgctgaagtctgcgcggccgctg
cgagactctagcaattcacctcttacatcaagggttgaatctgaaggaggtaatgtcagt
tctttcatgtcccgtaggacatctgatgcgctcgaggagcttgaatcttttaaagaaata
aaggagaacctgcttgcccgtagtagatcaaggatgcaagagtcattggataaatccttg
cgccattcttaa

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