Oryza glaberrima (African rice): 127764140
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Entry
127764140 CDS
T08853
Name
(RefSeq) cell differentiation protein rcd1-like
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127764140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127764140
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127764140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
127764140
NCBI-ProteinID:
XP_052144933
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All DBs
Position
2:complement(11018926..11025263)
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AA seq
315 aa
AA seq
DB search
MLTSEVPSPRDPELVERLILDLLDPELKGHALSELRKKREMFQNLAMLLWNSFGTVAALI
QVFSKKVVFMSATLSNSTLAQEIVVVYPALSPPTLSLGASNRVCNALALLQCIASHPETR
THFLQARIPLYLCAFLETDNKAKQFEYLRLTSLGVIGALVKVDDPKIINFLLENEFVPLC
LHNMTIGSELSKTVATFITEKIVVDDAGLAYVCANADRFYAVGAALATVVTSMVDQPSKR
LLKHVIRCYLRMSENPRGFAALQTCLPPQLKDGTFNSSLRDDPSGRHLHQQLLVKMTSGK
KGGGAGNSAGHVSWG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttgactagtgaggttcctagccctagggaccctgaacttgttgagcgtcttattctt
gatctgctagatccagaactcaaaggacatgctctttccgagctgcgcaagaaaagagag
atgtttcaaaacctggctatgctgttgtggaattcttttggcacagttgctgcactgatc
caggtcttctccaaaaaggtggtttttatgtcggccactcttagtaattcaacattagca
caagagattgtagtagtctaccctgcactttcacccccaactttgtcattaggtgcttca
aaccgagtttgcaatgcgctagcacttcttcagtgtattgcctcacatcctgagactagg
acccatttcttacaagcccgcattccgttgtacctatgtgcatttttggaaactgataac
aaggccaaacaatttgagtacttgcggttgaccagcttgggtgtcattggcgctcttgtt
aaggttgatgatccaaaaattatcaattttctgctggaaaatgaatttgttcctctgtgc
ctgcataatatgacgatcggcagtgaattatcaaaaactgtggcaacttttatcactgaa
aagattgtcgtagatgacgccggtctagcttacgtttgtgccaatgctgatcggttttat
gctgtgggagctgctttagcaaccgtggttacctcaatggttgatcagccttcgaagagg
ttgctgaaacacgttatccgttgttacctcaggatgtcagagaatcctaggggtttcgct
gcactgcagacttgccttcctcctcagctgaaagatggcacattcaacagctctcttagg
gatgatccttcggggcgacatttgcaccaacaactgctggttaagatgacaagtggaaaa
aagggaggaggagctggtaacagcgctggtcatgtgtcgtggggataa
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