Oryza glaberrima (African rice): 127764272
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Entry
127764272 CDS
T08853
Name
(RefSeq) myosin-6-like isoform X1
KO
K10357
myosin V
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127764272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127764272
04131 Membrane trafficking [BR:
ogl04131
]
127764272
03029 Mitochondrial biogenesis [BR:
ogl03029
]
127764272
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ogl04812
]
127764272
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127764272
mRNA cycle factors
P-body specific factors
127764272
Membrane trafficking [BR:
ogl04131
]
Others
Actin-binding proteins
Myosins
127764272
Mitochondrial biogenesis [BR:
ogl03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127764272
Cytoskeleton proteins [BR:
ogl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
127764272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Hpr_kinase_C
AAA_22
TsaE
CbiA
AAA_16
Motif
Other DBs
NCBI-GeneID:
127764272
NCBI-ProteinID:
XP_052145085
LinkDB
All DBs
Position
2:20152298..20175006
Genome browser
AA seq
1508 aa
AA seq
DB search
MASKVRFTVGSNVWVEDADVAWIDGLVEQVTGDELIIRCTSGKKVTANVSSVYPKDAEAK
RCGVEDMTRLAYLHEPGVLHNLKSRYGMNEIYTYTGNILIAVNPFQRLPHLYNNHMMEIY
KGAGFGELSPHPFAIADRAYRYMMNYGVSQAILVSGESGAGKTESTKMLMQYLAFMGGKV
QSGGRSVQQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQSGKISGAAIRTYLLE
RSRVCQISDPERNYHCFYMLCSAPAEERERYKLGDPASFHYLNQSNCIKLDGMDDSSEYI
ATRRAMDIVGISSDEQDAIFRVVAAILHLGNVEFVEGSEADSSVPKDDKSKFHLRTASEL
FMCDEKALEESLCKRVIATRGESIVKNLDARAAALSRDALARIVYSRLFDWLVNKINTSI
GQDPSSKLLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEID
WSYIQFVDNQEILDLIEKKPGGIIALLDETCMLRNSTHETFAEKLYQQFKGNQHFSRPKF
SRSDFTIHHYAGHVTYQTDLFLDKNIDYAVNEHQVLLHASRCSFVSSLFPPSEESTKSTK
FTSIGSSFKQQLQALLETLSSVEPHYIRCIKPNNVLKPAIFENSNVLQQLRCGGVLEAIR
ISCLGYPTRRTFDEFVDRFGVLLPEVLGESYDEVTATEMLLEKVNLTGYQIGKTKVFLRA
GQMAELDARRTEVLSSSASKIQRKVRSYLAHKHFIQLRLSATQLQAVCRGQIARHYYEDL
RRKAATLTIQTYYRMHFARKNYRDLCSASTTVQSGLRGMAARKELQYRQQTKAAVIIQSY
CRSYLAHSQYMGLKKAAITTQCAWRGRLARRELRKLKMAAKETGALQAAKNKLEKQVEEL
TWRLQLEKRIRVDMEEAKSQENKKLQQKLQELELQSNETKDLLKREQETAKAAWEKAALV
PEVQVDTTLVNELTAENEKLKTLVASLETKIDETEQRFDEVKKAREELLKKATDAESKIN
GLMNTMLSLQEKLTNMELENQVLRQQALFRSPVRTIPENTSPKANSTNGSPHGDEQMTPH
GTPPASKEYGKFAQPRPSFFERQHESVDALINCVTENIGFSEGKPIAAITIYKCLVHWKI
FETEKTSVFDRLIQIFGSTMQKHDSNEDLAYWLSTSSTLLIMLQKSLKAAGSSGGTPRKK
PQTQSSFLGRMVFRSSNITVDMDLVRQIEAKYPAFLFKQQLTAFVEGLYGMIRDNVKKEL
SSLLSHAIQVPRIMKASMVRGCSFGTSSLPRGRSFSNQGSYWQAIVDNLDELLKILQENC
VPAIFMRKIFTQIFSFINAQLFNSLLVRHECCSFSNGEYVKQGLAQMEVWCGEVKPEYVG
SALDELKHIRQAVGFLVIFKKFRISYDEIVNDLCPVLSVQQLYKICTQYWDDKYNTESVS
EEVLDEMRTLITKESGQDSSENTFLLDDEISMPISLEEIGDSMDSKEFQHIAPPPELVAI
PAFQFLKS
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaagtccgctttactgtgggttctaatgtttgggttgaggatgctgatgtg
gcttggattgatgggctggtggagcaggtcactggggatgaactaattataaggtgcact
tctgggaagaaggttactgcaaatgtatcaagtgtctatcccaaggacgcagaagcaaag
cgctgtggtgtcgaggatatgacgagactagcttatctacacgaaccaggagttctccat
aacctaaagtctagatatgggatgaatgagatatatacatatacaggcaacatattaata
gctgtgaatccatttcaaagacttcctcatctgtataacaatcatatgatggaaatttac
aaaggagcaggatttggtgagctgagcccccatccctttgccattgcagaccgtgcatat
aggtatatgatgaattatggtgtcagccaagccatattagtgagtggtgaaagtggtgct
ggtaaaacagaaagcactaaaatgcttatgcaatatcttgcttttatgggtggcaaagtt
caatcgggtggacggtcagtgcaacaacaagtgctggagtccaatcctgttcttgaggca
tttggaaatgcaaaaacagtcaggaataataattcaagtcgctttggtaaatttgttgag
attcaatttgatcagagtgggaaaatctcaggggctgccataaggacttatcttttggaa
agatctcgtgtttgccaaatatctgatccagagagaaattatcattgcttttacatgcta
tgttctgcaccagcggaggaacgtgaaaggtataagttaggagatcctgcatcatttcac
tatctcaaccagtctaattgcattaagcttgatgggatggatgactcttcagaatatatt
gcaactagaagagcaatggatatagtgggcatcagttctgatgaacaggatgcaatattc
agagttgttgctgcaatccttcatttgggcaatgtagaatttgtggaaggaagtgaagca
gattcttctgtacccaaagatgataaatccaagtttcatcttcggacagcttctgaactt
ttcatgtgtgatgagaaggctcttgaggaatctttgtgtaagcgtgtaatagcaacacgt
ggtgaaagtatagtaaaaaatttagatgcccgggcagcagctcttagtagagatgcattg
gccagaattgtctactcacggttgtttgattggcttgtaaataagatcaatacttcaata
gggcaagatcctagttcaaagcttctgataggtgtgctggatatatatggttttgaaagt
ttcaagacaaacagttttgagcagttttgtatcaacttaactaacgagaagctccagcag
cactttaatcagcatgtgtttaaaatggagcaagaggaatatacaaaggaagaaattgac
tggagttacatccaatttgtggacaatcaggagattcttgatctcattgagaagaaacca
ggggggataattgctctactcgatgagacttgcatgttgcgaaattcaacccatgaaaca
tttgctgagaagctatatcaacaatttaagggcaaccaacacttcagtaggccaaaattt
tcacgttctgatttcactattcatcactatgccggacatgttacttatcaaacagatttg
tttttagataagaacatagactatgctgtaaatgagcatcaagttctgttacatgcttct
agatgttcattcgtttcaagtctttttccaccttctgaagaatcaactaaatctacaaaa
ttcacatccataggttcaagctttaagcaacaactgcaagctttgttggaaactttgagt
tcagtagaaccacattacattcgctgtataaagccaaataatgttctcaagccagcaatt
tttgagaacagcaatgttctccagcaacttcgatgtggaggagtgctagaggcaataaga
ataagctgcctagggtacccaacaagaagaacatttgatgagtttgttgatcgttttggt
gttttgctacctgaagttcttggtgaaagttatgatgaagttactgctacagaaatgctt
cttgagaaagtcaatctcacaggctatcagatagggaaaacgaaagtgtttctgcgtgct
ggtcagatggctgagctagatgctcgaaggactgaggtcttgagcagttctgctagcaaa
atccagagaaaagttcgatcatacttggctcacaaacacttcattcagttgcgattatct
gctactcagcttcaggcagtatgcagaggacaaattgcaagacattattatgaagacctc
cgcaggaaggctgcgaccttgacaattcagacctattaccgtatgcattttgcaaggaaa
aattatagagatctctgttctgcatcaactactgtccaatctggtctacgtggcatggcg
gctcgcaaggaactccagtaccgtcagcagacaaaagctgcagtgattattcagagttac
tgtcgcagttatttagcacactcacagtacatgggcttgaagaaagcagcgatcacaacc
caatgtgcttggagagggaggttggccagaagagaacttcgaaaacttaaaatggctgca
aaagaaactggtgctctgcaagctgctaagaataaattagagaaacaagttgaagagcta
acttggcggcttcagctggagaaacgcattagggttgacatggaagaagccaagtcacaa
gaaaataagaagctgcaacagaaattgcaggaacttgaattgcagtccaatgaaacaaaa
gatttgttaaaaagggaacaagaaactgctaaagcagcatgggagaaagctgccttagta
ccagaggtccaggttgatacaactcttgttaatgagctcacagctgaaaacgagaagctc
aagacacttgtggcttctctcgagacaaaaattgatgaaacggaacagaggtttgatgaa
gtgaagaaagctagagaagagttgctgaagaaagccacagatgcagagtcaaagataaat
ggactaatgaacacaatgctaagtcttcaagaaaaactaacaaacatggaactggaaaat
caagttctccggcagcaggcactgtttcgttctcctgtgagaacaatacctgaaaacacg
tctccaaaagctaattcaactaatggcagtccacacggggatgaacagatgacacctcat
ggtacacctccagcttctaaagaatatgggaagttcgcacagccaagaccatcctttttt
gagaggcagcatgagagtgttgatgcactgataaactgtgttactgaaaacattggcttc
agtgaaggaaaaccaattgctgcaataaccatatataaatgtctggttcattggaagatc
tttgaaacagagaaaacatctgtttttgatcggcttattcaaatttttggttctacgatg
cagaaacacgatagcaatgaggatcttgcatactggttatcaacttcatcaactttattg
attatgttgcaaaagagcctaaaagctgctggctcatctggaggcactccacggaaaaaa
ccacagactcagtcatcattcctagggaggatggtgttccgctcgtcaaacatcactgtt
gatatggaccttgtgcgccaaattgaggccaagtatcctgcttttctttttaagcagcag
cttacagcttttgtcgaaggattatatggaatgatccgtgacaatgtgaagaaagaacta
tcttcactactctcacatgctattcaggtcccaagaatcatgaaagccagtatggtaaga
gggtgttcatttgggacatcgagtttaccaaggggacgttcattttcaaatcaaggtagc
tactggcaagcgatagttgataatttggatgaactattgaaaatcctacaagaaaattgc
gtcccggcaatttttatgaggaagatatttacccaaattttctcattcatcaatgcccaa
ctttttaatagccttcttgtacgccatgagtgctgctctttcagcaatggagagtatgtg
aaacaaggattagcacaaatggaggtgtggtgtggagaagtcaaaccagagtacgtagga
tctgcattggatgaactcaagcacataaggcaagctgttggtttcttggtcatatttaaa
aaattcaggatttcatatgatgagattgtcaatgatctgtgcccagtactaagtgtccag
cagctgtacaaaatatgcacacagtactgggatgacaaatacaacacagagagtgtatct
gaagaggtacttgatgaaatgaggacgctgataacgaaggaatcaggccaagatagttca
gagaatacctttttattggatgatgaaataagcatgcccatatcacttgaggagattggg
gattctatggattctaaagaatttcagcacatagccccaccaccagaacttgttgcaatc
cccgcattccaattcttgaagagctga
DBGET
integrated database retrieval system
