Oryza glaberrima (African rice): 127764315
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Entry
127764315 CDS
T08853
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03440
Homologous recombination
ogl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127764315
03460 Fanconi anemia pathway
127764315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogl03032
]
127764315
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127764315
Enzymes [BR:
ogl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127764315
DNA replication proteins [BR:
ogl03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
127764315
DNA repair and recombination proteins [BR:
ogl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
127764315
Bloom's syndrome complex (BTR)
127764315
FA (Fanconi anemia) pathway
127764315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
127764315
NCBI-ProteinID:
XP_052145137
LinkDB
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Position
2:complement(31830890..31840332)
Genome browser
AA seq
753 aa
AA seq
DB search
MKRQLPIKGASGASGSGHGKKAPQELENVLKQHFGYSGFRGKQLEAIEAVLSGRDCFCLM
PTGGGKSMCYQIPALVKSGIVLVISPLIALMENQVASLKSKGIPAEFLSSTQTSHNKQKI
HEDLDSGNPSLKLLYVTPELVATSGFKAKLTKLNNRGLLGLVAIDEAHCISTWGHDFRPS
YRKLSSLRNQFPDIPILALTATAVPKVQKDVISSLCLRNPLILRASFNRPNIFYEVRYKD
LLDDVYSDISNLLKSSGNVCSIVYCLERAVCDDLTMHLSQQGISSAAYHAGLNSKVRSSV
LDDWLSSRTQVVVATVAFGMGIDRQDVHIVCHYNLPKSMEAFYQESGRAGRDQQPSKSVL
YYGLDDRKKMEFILRNTKNKKSELSSSSTELSEKALADFSQIIDYCENSTCRRKMIIESF
GEKVQPTLCQRSCDACKHPNLVSSRLEELRRVPTCRYNKISPVFKSSLANPKHMETEFWN
HEDDASISVEDISDSDDGKEVVSNIAISKLPSKAGLDAKFKALERAENAYYQAKGQTKQQ
GGKLVDKKSISQTLRDASQKRLLNGLGQAKLRLGNLPFDEEPSAAHLEVECFKKYEKVGK
TFYNSQIAATVRWLSSSSLNQIQDRLHALADQITDHGAAASSPSIVPESPPASPDVICKI
PGEATSNEAKDIPLKNNTEEFVTTEHSDEIAKVAVLSENMELPKIPSFREFMSQKGRDRA
TSSSKVESLPSGVRRKVGIEKQGTTGPSKKMKS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacaacttcccataaaaggtgcatcgggggcctcgggatctgggcatggaaag
aaagctcctcaggagctggagaacgtcttgaagcaacatttcggatattcaggctttcga
ggaaagcaactagaggctatagaagctgttctttcaggaagggattgcttttgtttgatg
ccaactggaggtggaaaatcaatgtgctatcagattcctgctctagtgaagtcaggcatt
gttcttgttatctcacccttgatagcactaatggagaatcaggttgccagcttgaaaagc
aaaggtattccagctgagtttctctcgtcaacacaaacatcgcacaataaacaaaagata
catgaagaccttgattctggtaatccttctctaaaattgctatatgttactcctgagttg
gttgcaacatctgggttcaaggcaaagctaacaaagctcaacaatagaggtctccttggt
cttgttgctattgatgaggctcattgcatttcaacttggggccatgatttcagacctagt
taccgcaagctttcatcactgaggaaccagttcccagacatacctatattagctttaact
gcaaccgcagttccaaaagtccagaaagatgtgatatcgtcactgtgcttgagaaatcca
ttaattcttagggcatcatttaatcggcctaatatattctatgaagttcgctacaaggat
ctccttgatgacgtttattctgacatatcaaatttactgaagtccagtggaaatgtttgc
tcaattgtgtactgtcttgaacgtgcggtttgtgatgatctaactatgcatttgtcacag
cagggtatctcctctgctgcttatcatgctggcctaaatagcaaggtgcggagttctgtt
cttgatgattggctttcctcgagaactcaagttgttgttgccactgttgcatttggaatg
ggtattgatagacaagatgtccatattgtgtgtcactataacttgcctaagtccatggaa
gccttctaccaggagtcaggacgagctggccgtgaccaacagccttccaaaagtgttcta
tattatggattagatgaccgaaagaaaatggaatttattttgagaaacaccaagaacaaa
aagtcagagttatcgtcctcttcaactgaactttcagagaaggccttagccgactttagt
cagataattgattactgtgaaaattctacctgccgacgaaaaatgatcattgagagcttt
ggggagaaggtacaaccaactttatgccaacgctcatgtgatgcttgcaaacacccaaat
ctagtgtcctcacgtttggaggaacttcgtcgtgtgcccacctgtcgctataacaagata
tccccagtcttcaaaagctcgttggctaatccaaaacacatggagacagaattttggaat
catgaagatgatgcaagcatatcagttgaagatatatctgattccgatgatgggaaggag
gtggtgagcaatattgccatttcaaagctcccatcaaaagcagggctagatgcaaaattt
aaagcattggagcgtgctgaaaatgcttattatcaagcgaaaggtcagaccaagcagcag
ggtgggaagcttgttgacaagaagagcatatctcagacactaagagatgcaagccaaaag
cgattgttgaatggccttggacaagcaaagttgcgacttgggaatctaccgtttgatgaa
gagccttctgcagcacaccttgaggtagagtgcttcaagaagtacgagaaagtgggcaag
acgttctacaactcgcagatagccgccacagttcggtggctttcgtcttcgagcctcaac
cagatacaggaccgcctccacgcccttgctgaccaaatcacagatcatggtgctgcggca
agctccccttccatcgtcccagagtctcctccagcatctcctgatgtaatctgtaaaatc
cctggagaagctactagcaacgaagctaaggacatacctctgaagaacaacacggaggag
tttgtaacgacggagcattctgacgagattgcaaaggtggcggttttatctgaaaatatg
gagctccccaagataccatcattcagagaattcatgagccaaaaaggaagggatcgtgca
acgagttcttccaaagtagagagcctgccttccggtgttcgtagaaaggttggcattgag
aagcaagggacgacgggaccatccaagaagatgaaatcatga
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