Oryza glaberrima (African rice): 127764324
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Entry
127764324 CDS
T08853
Name
(RefSeq) vacuolar protein sorting-associated protein 20 homolog 2-like
KO
K12195
charged multivesicular body protein 6
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03250
Viral life cycle - HIV-1
ogl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127764324
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127764324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127764324
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127764324
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
127764324
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127764324
Exosomal proteins of other body fluids (saliva and urine)
127764324
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Ortholog
Paralog
GFIT
Motif
Pfam:
Snf7
TINF2_N
DUF5069
SpoIVA_middle
Motif
Other DBs
NCBI-GeneID:
127764324
NCBI-ProteinID:
XP_052145145
UniProt:
I1P1U1
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All DBs
Position
2:complement(22749156..22752663)
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AA seq
228 aa
AA seq
DB search
MGNIFVKKPKVTDVDRAILTLKTQRRKLAQFQQQLEKVIEAEKEAARQLVQQKKKDRALI
ALKKKKAQEELLKQVDTWQMNVEQQLADIELASKQKAVFDSLKAGNAALKSIQNEINIDD
VQKLMDDTAEAKAYQDEINAALGEQLSAEDEEAVMAEFENLEAQLAVESLPDAPVTEVRP
EEKSETPAVTEAAEDIDEVIELPDVPTKAPERPEAAEKTKVLEEPLPA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggggaacatcttcgtgaagaagcccaaggtgacggacgtggacagggccatcctcacc
ctcaagacgcagcgccggaagctcgcgcagttccagcagcagcttgagaaggtgattgaa
gcagaaaaggaagctgcacggcagctagttcaacaaaagaagaaagacagagctttgatt
gcactgaagaagaagaaagcacaggaagagctgctgaaacaagttgacacatggcaaatg
aatgtcgaacaacagctggcagacattgaactagcaagtaaacagaaggctgtatttgac
agcctaaaagctggaaatgctgctcttaagtctatccagaatgagataaatattgatgat
gtccaaaagttgatggacgacacagctgaggccaaggcttaccaagatgagataaatgct
gctctgggtgagcagctatctgctgaggatgaggaggctgttatggctgaatttgagaac
ttggaagcacagcttgccgttgagtctctaccagatgctccagttactgaagtacggcct
gaggagaaatcagaaacacctgctgtcactgaggctgcagaagacattgacgaggttatt
gagcttcctgatgtacccactaaggcaccagagagaccagaagctgcagaaaaaacaaaa
gttttggaagaacccctacctgcatag
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