Oryza glaberrima (African rice): 127764526
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Entry
127764526 CDS
T08853
Name
(RefSeq) probable starch synthase 4, chloroplastic/amyloplastic isoform X1
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00500
Starch and sucrose metabolism
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
Module
ogl_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
127764526
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogl01003
]
127764526
Enzymes [BR:
ogl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
127764526
Glycosyltransferases [BR:
ogl01003
]
Polysaccharide
Storage polysaccharide
127764526
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
Glyco_transf_4
Glyco_trans_4_4
Motif
Other DBs
NCBI-GeneID:
127764526
NCBI-ProteinID:
XP_052145375
LinkDB
All DBs
Position
1:complement(27520390..27529769)
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AA seq
975 aa
AA seq
DB search
MAACGAAAAEYSALLSLSCGPITRRRFAVSCRARPPGNLSAQQKKKRGKNIAPKQRSSNA
KLLLTTEENGQLPSTSLRTSMERPQKSTSSEDDTNGAISQIDEKITAIGNEQQERSKDKH
FESDFQLEDFGEMIQNMEKNILLLNQARLQAIEDVDKILTEKEALQKKVDTLEMNLSKAL
ATKGNINTDIPGDHLEKFTKEILIESALSGGNPAHLCESPLFMELTVLKEENMLLKADAQ
FLKAKIVEFAETEEFLFKLEKERSLLDATVRELEARFLVAQTDIWKVVPLQYDVWMEKVE
NLQHMLGCLKNHVEKYAALLDQHDDLHDKIDELEASLKEGKTSEFSPYVVELLQQKLKAA
KSRHQAGHQETNTHIQVYQQLTEEFQDNLGRLTEESGRLEHSANSMPSEFWSHILLMIDG
WFLERKIPNTDARMLREMAWKRDDRICEAYFACKGAKESDVMETFLKLMLSGNSQCSSGL
HIVHIAAEMAPVAKVGGLADVVAGLGKALQTKGHLVEIVLPKYDCMQLDQITNLKVLDVV
IQSYFDGNLFSNNVWTGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRYSYFSRAALE
LLYQSGKKIDIIHCHDWQTAFVAPLYWDIYATRGFSSARICFTCHNFEYQGTAPAPDLSY
CGLDVEQLDRPDRMQDNAHGRINVAKGGIVYSNIVTTVSPTYALEVRSEGGRGLQDTLKM
HSRKFVGILNGIDTGTWNPSTDRFLAVQYSATDLQGKAANKAFLRKQLGLYSEDASQPLV
ACITRLVPQKGLHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGVADQFQKNNNIRLI
LKYDEALSHCIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRQTGGLCDSVFDFDDET
IPVELRNGFTFARTDEQDLSSCLERAFSYYSRKPMVWKQLVQKDMQIDFSWDSPASQYEN
LYQSAVAQARGAAQT
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttgcggcgccgcggcggcggagtattcagctctcctgtccctctcatgtggg
cctatcactcgccgccgtttcgccgtctcctgccgcgctcgaccgcccggcaacctcagt
gcacagcagaagaagaagcgagggaaaaacattgctccaaaacagcgctcttcaaatgca
aaactcttgcttactactgaggaaaatggacagcttccaagtaccagtttgaggacttct
atggaacgtcctcagaagagtacatccagtgaggacgataccaatggggctattagccag
atagatgaaaaaattacagccattggtaatgaacagcaagagaggtcaaaggataaacat
ttcgaatcagactttcaacttgaagattttggggaaatgatacaaaacatggaaaagaat
attctgctcctaaatcaagctcgtcttcaagcaattgaagatgttgacaaaattcttact
gaaaaggaagctttgcagaaaaaggttgacactctagagatgaatttgtcaaaagcactt
gcaaccaaagggaacataaatacagatatccctggtgatcatttagagaaatttacaaaa
gaaattttgatagaaagtgctctaagtggaggcaatccagcacatttgtgtgagtctcca
cttttcatggagctgactgttctaaaagaagagaatatgctacttaaggctgacgcacaa
tttcttaaagcaaagattgttgagtttgctgaaacagaggaattcctattcaaattggag
aaagaaaggtcactgttagacgctacagttagggagctggaagctaggtttctagttgct
caaactgatatctggaaagttgtccctctgcaatatgatgtttggatggagaaagtagaa
aatctgcaacacatgcttggatgtttgaaaaatcatgtagagaagtatgctgcattgttg
gatcagcatgatgatctgcatgacaagattgatgagctagaagcatcactaaaagaaggg
aaaacatctgagttttctccttatgttgttgaacttctgcaacagaagttgaaagcagca
aaaagccgtcaccaagcaggccatcaagaaacaaacactcacattcaagtatatcagcag
ttaactgaggaatttcaagataaccttggtagactaacagaagaaagtggcagactggag
cattctgcgaatagtatgccatcagaattctggagtcacatcctgctcatgattgatggt
tggttccttgagcggaaaataccaaatactgatgcacgtatgctgagagaaatggcatgg
aagagagatgaccgtatctgtgaagcctactttgcttgcaagggtgcaaaagaaagtgat
gttatggaaactttcctaaagctaatgttatcaggaaacagtcaatgcagttctggcttg
cacattgtccatatagcagcagagatggctccagtggcaaaggttggcggtctggcagat
gtagttgctggtcttggcaaggcacttcagactaagggacatttagtagagattgttctt
cccaaatacgactgtatgcaacttgaccagattactaatcttaaggttttagatgttgtc
atacaatcctattttgatggaaatctattcagcaacaacgtgtggacaggaactgttgaa
ggtcttccagtctattttattgagccacagcatccttcaaaattcttctggagggcccaa
tactatggagagcatgatgattttaaacgttattcatactttagccgtgcagcactggaa
ttactttaccaatctgggaagaaaattgatataatccactgccatgactggcaaactgca
tttgttgcacctctatattgggatatatatgcaactcgaggcttcagctcagctagaatt
tgtttcacttgccacaacttcgaataccaaggtacagcacctgctcctgatttatcatat
tgcggccttgatgttgagcagttggatagaccagacaggatgcaagacaatgcacatgga
agaataaatgttgccaagggtggaattgtttattccaatattgtgacaactgtatcacca
acatatgctttagaagtgcgctcagagggtggtcgtggtctccaagatacacttaaaatg
cattccaggaaatttgtggggatacttaatggaatcgacacaggaacatggaacccttcc
acagacagatttcttgctgtgcaatatagtgctactgatcttcaggggaaagcagcaaac
aaagcatttctcaggaagcagctagggctgtattctgaggatgcctctcaaccactggta
gcctgcattacgaggctagttcctcaaaagggtctacatcttatcaggcatgcaatatac
aaaacagctgagttaggaggacagtttgtactcctgggttcaagtccagttccacatatt
cagagggaatttgagggtgttgcagaccaattccagaagaataacaatattaggttaatt
ctgaaatatgatgaagctttgtctcattgtatttatgcggcatctgacatgtttatcatt
ccatcaatgtttgagccttgtggccttactcagatgatagctatgagatatggttctgtg
ccaattgttcgacaaactggtggattgtgtgatagtgtttttgattttgatgatgaaact
atacctgtggagctgcggaatggctttacatttgctaggacagatgagcaggatctaagc
agttgcttggaaagggcattcagctactacagcagaaaacctatggtttggaaacagtta
gtgcagaaggatatgcagattgatttcagctgggattctccagcttcacagtacgaaaac
ctttatcagagtgctgttgctcaggcaaggggagcggctcaaacataa
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