Oryza glaberrima (African rice): 127764615
Help
Entry
127764615 CDS
T08853
Name
(RefSeq) protein transport protein SEC13 homolog B-like
KO
K14004
protein transport protein SEC13
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03013
Nucleocytoplasmic transport
ogl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127764615
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127764615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127764615
04131 Membrane trafficking [BR:
ogl04131
]
127764615
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127764615
Membrane trafficking [BR:
ogl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127764615
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127764615
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
127764615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
127764615
NCBI-ProteinID:
XP_052145471
LinkDB
All DBs
Position
2:1770616..1772784
Genome browser
AA seq
305 aa
AA seq
DB search
MPPHKIETGHQDVVHDIAMDYYGKRIATASSDNTIKIIGVSGNSHQQLATLSGHQGPVWQ
VAWAHPKYGSLLASCSYDGRVIIWKEGSKPDEWAQAHTFIEHKSSVNSIAWAPHELGLCL
ACGSSDGNISVFTARSDGGWDTTRIDQAHPVGVTSVSWAPAMAPGALINTGPSGQFEYVQ
KLASGGCDNTVKVWKLYNGSWRMDCFPALQMHRDWVRDVAWAPNLGLPKSTIASASQDGT
VVIWTAPKEGEQWEGRVLYDFQTPVWRLSWSLTGNILAVSDGNDNVTLWKEAVDGEWQQV
TTVEA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcctccccataagatagagacaggccaccaggatgttgtgcatgacattgccatggat
tactatgggaagcgcatcgctacagcctcttctgataacacaataaagatcattggtgta
agcggcaactctcaccagcagcttgctactctgagcggacatcagggccctgtctggcaa
gttgcatgggctcatcctaagtatggttccttgctggcatcctgcagctatgatgggagg
gttatcatatggaaggaagggagcaagcctgatgaatgggcgcaggcgcacactttcatt
gagcacaagtcctctgtcaattccattgcttgggcacctcatgagcttgggctctgcttg
gcttgtggctcatctgatggcaacatttcagtctttactgctcgttctgatggtgggtgg
gacacaacacgcatcgatcaggctcacccagtgggtgtcacctctgtttcttgggctcct
gcaatggcgccgggtgctctaatcaatacagggccttctggtcagtttgaatatgttcaa
aaacttgcctctggtggttgtgacaatacagtcaaggtatggaaactgtacaacgggagt
tggaggatggattgctttccggctcttcagatgcacagggactgggtgagagatgttgcc
tgggctccaaatctaggccttccaaagtcaacaattgcaagtgcctcccaggatggaacg
gttgtaatctggacagcaccgaaagaaggcgagcagtgggaaggcagggttctctatgat
ttccagacacctgtgtggaggttatcctggtcattgactggaaatattctggcagtgtct
gatggtaatgataatgtgaccctatggaaagaagccgttgatggcgaatggcagcaagtg
accactgttgaggcttag
DBGET
integrated database retrieval system
