Oryza glaberrima (African rice): 127764632
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Entry
127764632 CDS
T08853
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-1
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127764632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127764632
Spliceosome [BR:
ogl03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
127764632
Complex B
127764632
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
127764632
NCBI-ProteinID:
XP_052145494
UniProt:
I1NZ82
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Position
2:complement(9281449..9285498)
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AA seq
228 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFQVGAPFNQHLLSFPGGVPRPRLPILPTPGMPLGVPQVPGAPLMPGVRPPILPAPGI
PGYPGAPNVPTMPQTGAPPGSMPPGSMPPGSMPMQMAPLPRPPTLPPPTSGAPGAPIPNS
GAPPAMYQTNPPQPAGPTSGAPPPVAAPPPAAPPQAPFSYAQPPEGNH
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtactattgcgactactgcgacacctatctgacccatgactctccatctgtc
cgtaaacagcacaatgctgggtacaaacataaggcaaatgttcgaacctactatcaacaa
tttgaggagcagcaaactcaaagcttgattgatcaaagaattaaagaacatcttggacaa
gctgcagctttccaagttggtgctcctttcaatcaacatcttctctcatttccaggaggt
gtgcctcgtcctcgtcttccaattctgccaacacctggcatgccacttggtgttcctcaa
gtacctggtgcacctttgatgccaggcgttaggcctcctattttgccagctcctggtatt
ccaggttatcctggtgctccaaatgttccaaccatgccacaaacaggcgccccacctggt
tccatgccgcctggctctatgccacctggttctatgcctatgcagatggcacctctccca
aggcctccgacactaccacctccaacatctggagccccaggggcccccatccccaacagt
ggggcacctccagccatgtatcaaacaaatccaccgcaacctgcaggcccaacttctggt
gctccacctccggttgctgctccacctccagcagcacctccacaggctcctttctcctat
gcacaacctcctgagggcaaccactga
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