Oryza glaberrima (African rice): 127764694
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Entry
127764694 CDS
T08853
Name
(RefSeq) high mobility group B protein 13-like
KO
K09273
upstream-binding transcription factor
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127764694
03021 Transcription machinery [BR:
ogl03021
]
127764694
Transcription factors [BR:
ogl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
127764694
Transcription machinery [BR:
ogl03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
127764694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
InvH
Motif
Other DBs
NCBI-GeneID:
127764694
NCBI-ProteinID:
XP_052145567
LinkDB
All DBs
Position
2:complement(8922501..8924543)
Genome browser
AA seq
503 aa
AA seq
DB search
MATAGSRKGGRGRKALTAVLDNDANISAGKADVAAAAGILSPPQKAKRATSKSSKGKAAA
AAAAEEQASVVDAVSELQGMLEKLRLEKEKAEEMVRERDEVIRRKEEEQGRLQAELKKVQ
RAKEFKPTVSIPLVKALIEKDQEGEKKKGKGKAGHERKKPCPAYVLWCKDQWNEIKKESP
DADFKEVSNALGAKWKALGAEEKQPYEERYRQEKEAYLQVVGQEKREAEAMKLLEEEQMQ
RTAKELLEQYLKFRQEADDDGDGGDNKKASKKGKKKKEKDPSKPKQPMSAYFVYTQQRRA
ALVAEKKNVPEIGRITGEEWKAMSEAEKAPFEAAARKQREEYQVEMAAYRQRKQEEAACQ
EKEEEEQKKIMKQEALQLLKKKEKTDNIIKKTKEEQRKKKVSGAAAAADPNRPKKPASSF
LLFSKEARRQLAEERPGVASSTLTALVSVKWKELGEAEKQAWNGKAAEAMAAYKRDMEEY
TKAAASGGGGGDASPCTSSSASS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgggtagtaggaagggcgggaggggccggaaggcgctgacggcggtgctg
gacaacgacgccaacatctccgccgggaaggccgacgtggccgctgccgccgggatcctg
tcgccgccgcagaaggcgaagagggcgacgtcgaagagcagcaaggggaaggccgcggct
gcggcggcggcggaggaacaggcgtcggtggtggacgcggtgtcggagctgcaggggatg
ctggagaagctgcggctggagaaggagaaggcggaggagatggtgcgggagcgggacgag
gtcatccgcaggaaggaggaggagcagggtcgcctccaggccgagctcaagaaggtccag
cgcgccaaggagttcaagcccaccgtgagcattcctctcgtgaaggcattgatcgagaaa
gaccaggaaggagagaagaagaagggcaagggcaaggccggccatgagaggaagaagccc
tgcccggcgtacgtcctctggtgcaaggaccagtggaacgagatcaagaaggagagcccg
gacgccgacttcaaggaggtctccaacgctctgggcgccaagtggaaggcgctgggcgcg
gaggagaagcagccgtacgaggagaggtacaggcaggagaaggaggcgtacctgcaggtg
gtcgggcaggagaagcgcgaggccgaggcgatgaagctgctcgaggaggagcagatgcag
aggaccgccaaggagctgctcgagcagtatctcaagttccggcaggaggccgacgacgac
ggcgacggcggtgacaacaagaaggcgagcaagaaagggaagaagaagaaggagaaggac
ccctccaagccgaagcagcccatgtccgcctacttcgtctacacccagcagcgccgcgcg
gcgctcgtcgccgagaagaagaacgtccccgagatcggcaggatcaccggcgaggagtgg
aaggcgatgtccgaggcggagaaggcgccgttcgaggcggcggcgcggaagcagagggag
gagtaccaggtggagatggcggcgtaccggcagaggaagcaggaggaggcggcgtgccag
gagaaagaggaggaggagcagaagaagatcatgaagcaggaggcgctccagctgctcaag
aagaaggagaagacggacaacatcatcaagaagaccaaggaggagcagaggaagaagaag
gtgagcggcgccgccgctgccgccgacccgaaccggcccaagaagccggcgtcgtcgttc
ctgctgttcagcaaggaggcgaggcggcagctggcggaggagcgccccggcgtggcgagc
tccacgctgaccgcgctcgtgtcggtgaagtggaaggagctcggggaggcggagaagcag
gcgtggaacggcaaggccgcggaggccatggcggcgtacaagagggacatggaggagtac
accaaggcggcggccagcggcggcggcggcggcgacgcctccccctgtacgtcctcctcg
gcctcgtcctag
DBGET
integrated database retrieval system
