Oryza glaberrima (African rice): 127765155
Help
Entry
127765155 CDS
T08853
Name
(RefSeq) probable DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogl03032
]
127765155
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127765155
Enzymes [BR:
ogl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
127765155
DNA replication proteins [BR:
ogl03032
]
Prokaryotic type
DNA Topoisomerases
127765155
DNA repair and recombination proteins [BR:
ogl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
127765155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
127765155
NCBI-ProteinID:
XP_052145954
LinkDB
All DBs
Position
3:complement(33299536..33313149)
Genome browser
AA seq
937 aa
AA seq
DB search
MALSAALRLPLPRLLWGPTGSLLAAAAAASRRRAAVVAVPAARFLSSSSDGSRHVQPLRA
GRDERAAAGEGGAAVKERVVPVELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRIL
YAMHEMGLASRRPFRKCARVVGEVLGKFHPHGDSAVYETLVRMAQDFSMRYPLVQGHGNF
GSIDADPPAAMRYTECRLDSLTEAMFLTDLELNTVDFVPNFDNSQKEPSLLPARVPSLLL
NGSSGIAVGMATNIPPHNLGELVDVLSVMIENPEATLQELLECMPGPDFPTGGTIVGNQG
ILEAYKTGRGRVVMRGKTDIETIDVKSKRSAIIIKEVPYQTNKSTLVERIAELVEEKVLE
GISDIRDESDRSGMRVVIELKRGADPAIVLNNLYRHTALQSSFSCNMVAILDGQPKLMGL
KEILQAFIDFRCSVIERRARFKLSQALERKHIVEGIVIGLDNLDSVIQIIRGTSNHAMAR
ESLIKEFGLSDKQAEALLDITLRKLTSLERKKFVDEAKSLSEEISKLNELLSNKKLIFQL
ILQEATDLKNKFATPRRSFIEDSASTEVDDLDIIPNEEMLLVRNILSEKGYVKRMKPNTF
NLQNRGTIGKSVGKMRMNDNTSDFIVCQTHDHVLYFSDKGIVYSARAYKIPECTRAATGT
PLVQLLSLSDGERITSIVPVNEFGEDQYLVMLTVNGYIKKVPLNAFSAIRTSGIISIQLA
PGDELKWVRRCGDDDLVALASQNGMVIVNTCNKLRALGRKTRGVLAMKLKEGDKMASMDI
IPATSHNMPETYSRVRDLSPPWLLFIADNGIGKRVPLNAFRQGNFNRVGLQGYKLPPDCS
LAAVFVVGFSLTDDGESDEQVVLVSQSGTVNRIKVKDISIRSRSARGVILMRLEHAGKIQ
SASLISAAEEEEEQDPESASLISEAEEPEKQDPEVSA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggctctctcggcagcgctccggctgccgctcccgcgcctcctgtggggccccacggga
tcgctcctcgcggcggccgctgcggcctcccgccgccgcgccgcggtcgtggccgtaccc
gccgcccgcttcctctcctcctcctcggatggctcgcgccacgtgcagcccctccgcgcg
ggccgcgatgagcgggcggcggcgggtgagggcggggcggcggtgaaggagcgggtggtg
cccgtggagctccacaaggaggccaccgaggcgtacatggcgtacgccatgtcggtgctg
ctcggccgcgcgctccccgacgtccgagatgggctcaagccagtgcaccgcaggatactt
tatgctatgcatgagatgggtcttgcatcccgtagaccattcagaaaatgtgcaagggtt
gtcggtgaggtactaggtaagttccatccacatggagattcggccgtatatgaaacctta
gtacggatggctcaggacttctcaatgaggtatccacttgttcaaggtcatggaaatttt
ggttccatagatgctgatcctcctgccgcaatgcgatatacagagtgccgcttggattca
ctaacagaagccatgttcctgactgatctggagttgaatacagttgacttcgtcccaaac
tttgataattcacagaaagagccttctctgttgccagctcgtgttccatctctattgttg
aatggttcttctggaattgcagttggaatggcaacaaatattcctcctcataatctgggt
gagcttgttgatgtgctctctgttatgattgaaaaccctgaagctactctccaagaacta
ctagaatgcatgcctggacctgactttcctacaggagggacaatcgtgggaaatcaaggt
attttggaggcctataagactgggcgtggtcgagtcgttatgagaggcaaaactgacatc
gaaacaattgatgtgaaaagcaaacgctctgccattataattaaagaggttccataccaa
acgaataaatccactcttgttgaaaggatagctgagcttgttgaagaaaaggtattagaa
ggcatcagtgatattcgggacgaaagtgatcgctctggaatgcgtgtagtaatagagctg
aaaagaggtgcagatcctgccatagttctgaacaacttgtaccgtcatacagctctgcaa
tctagttttagctgcaacatggtagctatccttgatgggcagccaaaattgatgggactg
aaggaaattcttcaggcattcattgacttcagatgttctgttattgaaaggcgtgcaaga
tttaagctttcacaagctctggaaaggaaacatatcgttgagggcattgttattggtctt
gacaatttggattctgttatccaaataataagaggaacatccaatcatgcaatggcaaga
gaatctttaatcaaggaatttggtctgtctgacaagcaagcagaagccctattggatatc
acactaaggaaacttacttcccttgagcggaaaaaatttgttgacgaagctaaatctttg
tcagaggagatctccaagttaaatgagctcctgtctaacaagaagcttatttttcagctt
attttacaagaggcaactgacttaaagaacaaatttgctaccccacgacgttctttcata
gaagattcagcaagcactgaagttgatgatcttgatattattcctaatgaggaaatgctt
ttggtgagaaacattcttagtgagaagggctacgttaagcgtatgaagcctaataccttc
aatctacaaaaccggggaacgatcggaaaatctgttggaaagatgcgaatgaacgacaat
acatccgatttcattgtctgccaaacacatgatcatgtcctttacttcagtgacaaggga
atagtatactcagcacgtgcttataagatacctgaatgcacaagagctgcgactggaact
ccactggtacagctgctttctttgtccgatggggagagaataacctccatcgttcctgta
aatgaatttggtgaagatcagtatcttgtgatgctgaccgttaacggttatatcaagaaa
gttcctcttaatgctttctcagcaatcaggacttctgggatcatttcaattcaactggct
cctggtgatgagctgaagtgggttcgtcgttgtggggatgatgaccttgttgctttggct
tcacaaaatgggatggttatagttaatacatgcaacaagcttcgcgcccttggaaggaaa
acaaggggcgtcctggcaatgaagctaaaggaaggcgacaagatggcatccatggatata
attccagcaacgtcgcataacatgcctgaaacttacagcagagtcagagatttgagtccg
ccatggctgcttttcatagctgataatggtattgggaagcgtgtgcccctaaatgcattc
cggcaaggaaatttcaacagagtaggcttgcaaggctacaagcttccaccagactgtagc
ttagctgctgtatttgttgttggattttcacttactgatgacggtgaaagtgacgaacag
gtggttttagttagccagagtggtactgtaaacagaatcaaagtcaaagatatatccatc
cggtctcgttccgcaaggggagtcattctgatgaggctggaacatgctgggaagatccag
tcagcctcactaatatcagcagcagaagaggaggaagaacaggacccggagtcagcctca
ctaatatcagaagcagaagagccggaaaaacaagacccggaggtctcagcttag
DBGET
integrated database retrieval system
