Oryza glaberrima (African rice): 127765595
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Entry
127765595 CDS
T08853
Name
(RefSeq) DNA polymerase delta small subunit isoform X1
KO
K02328
DNA polymerase delta subunit 2
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03030
DNA replication
ogl03410
Base excision repair
ogl03420
Nucleotide excision repair
ogl03430
Mismatch repair
ogl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127765595
03410 Base excision repair
127765595
03420 Nucleotide excision repair
127765595
03430 Mismatch repair
127765595
03440 Homologous recombination
127765595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogl03032
]
127765595
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127765595
DNA replication proteins [BR:
ogl03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
127765595
DNA repair and recombination proteins [BR:
ogl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
127765595
MMR (mismatch excision repair)
DNA polymerase delta complex
127765595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
127765595
NCBI-ProteinID:
XP_052146492
LinkDB
All DBs
Position
3:complement(1577462..1581325)
Genome browser
AA seq
429 aa
AA seq
DB search
MERKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLG
LEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVTL
AGAIPPAAYVTGVVIALHGKETSAGNFLVEDILEAGIPPQITLPSINEDKYVVFVSGLSI
GSEKFNPLQFQLLIDHITGHLGDENEQSIASNIVRVVVAGNSVHISPRFFNGQAVASKDQ
SRIAEPIKELDIMLTQLVASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSSCS
NPHQFELDSVRFIGTSGQNIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPYTD
KDPFLVESCPHVYFVGNQDKYETQLLQGPEKQKVRLICIPRFCDSGVAVMLNLRNLECST
LSFSTSFDA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaagcaggcggagtacagcaacctcgacgagaggtacgcgatccagggggag
aagtaccaggggcagcagtacagccacatctacttcacgcgactccaccacatgcgcaac
ctcctccacgccctcgtcccctcctggaagccgcaccttcctgttactactgtgttggga
cttgaagaaggaaaggattgcataatcgttggaactttatataagcacatgaaattaaag
ccttccattcttgatgaatattctaaggagaggtctgctattcctcttgttaaaccacac
aatttcatgcatcctgatgatcatctcattctggaagatgaaagtgggagagttacactt
gcaggagccatacctccagcagcatatgttactggagttgtaatagctttacatgggaaa
gaaacaagtgctggcaactttcttgttgaagatattcttgaggctgggattcctcctcaa
attacgttacctagcataaacgaggacaaatatgtggtatttgtgtcgggattaagtatt
gggagtgaaaaattcaatcctctgcaattccaacttcttatagaccatatcacagggcat
ttgggtgatgagaatgagcaatccatagcatccaacatagtacgcgttgtggtggctggg
aattcggtacatatttctccaagattcttcaatggtcaggcagtagcatcgaaagatcaa
tccaggatagctgaaccaatcaaagaattggatataatgctcactcagcttgtggcatca
ttgcctgtggacatgatgcctggatctaatgacccagcaaatttttctttgcctcaacag
cctttgcatagatgcctttttgctggagcagccacttataacactttttcatcgtgctcg
aatccacatcaattcgagcttgatagtgtccggtttattggaacatctggacagaacata
gatgacctctacaagtactctgatgccaaagacaagctggaattcgtggaaagaacactg
cggtggcgtcatcttgctccaactgctccaaacagtctaggatgttatccatacacagac
aaggatccttttctcgttgaaagctgtccccatgtttacttcgtcgggaatcaagataaa
tatgaaactcaattattgcaagggccagaaaaacaaaaggtgaggctgatctgcattcca
agattttgtgatagtggagttgccgtcatgctcaatttgaggaacttggagtgcagcacg
ttgagtttctcaacaagcttcgatgcttga
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